RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ZNF507Q8TCN5 953 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 ING5Q8WYH8 240 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 ATOH1Q92858 354 aaPredicted RBP10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 SMARCD2Q92925 531 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 MCRS1Q96EZ8 462 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 TMEM209Q96SK2 561 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 KXD1Q9BQD3 176 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 CBWD1Q9BRT8 395 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 FAM213AQ9BRX8 229 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 LRRC27Q9C0I9 530 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 GPR88Q9GZN0 384 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 CA14Q9ULX7 337 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 SIT1Q9Y3P8 196 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 YIPF1Q9Y548 306 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 ASB3Q9Y575 518 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 KPNA7A9QM74 516 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 TGFB1I1O43294 461 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 PRPF6O94906 941 aaKnown RBP10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 IDEP14735 1019 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 CPB1P15086 417 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 WEE1P30291 646 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 TAF6P49848 677 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 MLLT6P55198 1093 aaPredicted RBP10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 SMARCB1Q12824 385 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 PLD1Q13393 1074 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 FZD5Q13467 585 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 PKP1Q13835 747 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 MLF2Q15773 248 aaPredicted RBP10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 WSCD1Q658N2 575 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 PDZD4Q76G19 769 aaPredicted RBP10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 DNAJB7Q7Z6W7 309 aaPredicted RBP10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 LRRC52Q8N7C0 313 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 C1orf127Q8N9H9 656 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 PJA1Q8NG27 643 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 SHKBP1Q8TBC3 707 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 SPATA18Q8TC71 538 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 KCNG4Q8TDN1 519 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 PSMG2Q969U7 264 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 CLDN23Q96B33 292 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 NELL2Q99435 816 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 PKMYT1Q99640 499 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 MKNK1Q9BUB5 465 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 MAGEF1Q9HAY2 307 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 ZFP14Q9HCL3 533 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 FAM86C1Q9NVL1 165 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 GDAP2Q9NXN4 497 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 SIX4Q9UIU6 781 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 PCDHA7Q9UN72 937 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 SLC27A5Q9Y2P5 690 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 MYH15Q9Y2K3 1946 aa10.5□□□□□ -0.73
TMEM39A-210ENST00000490099 GVINP1Q7Z2Y8 2422 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 KANSL1LA0AUZ9 987 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 ARNTLO00327 626 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 GABRDO14764 452 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 EIF3DO15371 548 aaKnown RBP eCLIP10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 F13A1P00488 732 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 PNPLA4P41247 253 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 TUFMP49411 452 aaKnown RBP10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 EPHB3P54753 998 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 SNRPFP62306 86 aaKnown RBP10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 AMPD3Q01432 767 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 SNW1Q13573 536 aaKnown RBP10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 ANGPT1Q15389 498 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 BMT2Q1RMZ1 405 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 RESP18Q5W5W9 173 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 ARMCX5Q6P1M9 558 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 MAMSTRQ6ZN01 415 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 GAREM2Q75VX8 874 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 MAML2Q8IZL2 1156 aaPredicted RBP10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 ELMOD1Q8N336 334 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 TTC9BQ8N6N2 239 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 C2orf15Q8WU43 125 aaKnown RBP10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 TMEM174Q8WUU8 243 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 DNASE1L2Q92874 299 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 HPS3Q969F9 1004 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 SAAL1Q96ER3 474 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 PGLYRP2Q96PD5 576 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 IL21Q9HBE4 155 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 ASAH2Q9NR71 780 aa10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 RBAKQ9NYW8 714 aaPredicted RBP10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 EP300Q09472 2414 aaPredicted RBP10.49□□□□□ -0.73
TMEM39A-210ENST00000490099 PVALEFA0A1B0GWK0 134 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 POLR2DO15514 142 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 MYL4P12829 197 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 PSMC3P17980 439 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 ATF6P18850 670 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 ALDH1A3P47895 512 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 TFAMQ00059 246 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 FCHO2Q0JRZ9 810 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 TEAD2Q15562 447 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 SV2CQ496J9 727 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 VITQ6UXI7 678 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 TMEM92Q6UXU6 159 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 STXBP4Q6ZWJ1 553 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 UNC13DQ70J99 1090 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 ASCL5Q7RTU5 278 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 METTL23Q86XA0 190 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 HSCBQ8IWL3 235 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 C12orf56Q8IXR9 622 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 SYCP3Q8IZU3 236 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms