RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 SPIRE2Q8WWL2 714 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 HAPLN2Q9GZV7 340 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 SMOC1Q9H4F8 434 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 TASP1Q9H6P5 420 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 UBQLN1Q9UMX0 589 aaKnown RBP15.18■□□□□ 0.02
VARS-227ENST00000489979 TTC26A0AVF1 554 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 CLTAP09496 248 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 CCDC192P0DO97 292 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 MAPTP10636 758 aaKnown RBP15.17■□□□□ 0.02
VARS-227ENST00000489979 TYMPP19971 482 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 WEE1P30291 646 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 CDC25AP30304 524 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 TRAPPC10P48553 1259 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 NEK4P51957 841 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 GNL2Q13823 731 aaKnown RBP15.17■□□□□ 0.02
VARS-227ENST00000489979 ZPBP2Q6X784 338 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 KCNK18Q7Z418 384 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 LPIN3Q9BQK8 851 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 TIPINQ9BVW5 301 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 RAB34Q9BZG1 259 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 SMG9Q9H0W8 520 aaKnown RBP15.17■□□□□ 0.02
VARS-227ENST00000489979 NOL7Q9UMY1 257 aaKnown RBP15.17■□□□□ 0.02
VARS-227ENST00000489979 SLC8A2Q9UPR5 921 aa15.17■□□□□ 0.02
VARS-227ENST00000489979 ZNF638Q14966 1978 aaKnown RBP15.16■□□□□ 0.02
VARS-227ENST00000489979 FRYQ5TBA9 3013 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 CCDC163A0A0D9SF12 145 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 LACTBL1A8MY62 500 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 PPEF2O14830 753 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 KCNK5O95279 499 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 PLS3P13797 630 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 GUCY2CP25092 1073 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 TNFSF9P41273 254 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 MCM2P49736 904 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 CDR1P51861 262 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 SMTNP53814 917 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 PPP2R3AQ06190 1150 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 PLA2G2CQ5R387 149 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 FSTL4Q6MZW2 842 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 ARMCX5Q6P1M9 558 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 SENP8Q96LD8 212 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 SEPT5Q99719 369 aaPredicted RBP15.16■□□□□ 0.02
VARS-227ENST00000489979 MMTAG2Q9BU76 263 aaKnown RBP15.16■□□□□ 0.02
VARS-227ENST00000489979 LSM14BQ9BX40 385 aaKnown RBP15.16■□□□□ 0.02
VARS-227ENST00000489979 IL21Q9HBE4 155 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 GKN1Q9NS71 199 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 POLR3BQ9NW08 1133 aaPredicted RBP15.16■□□□□ 0.02
VARS-227ENST00000489979 THG1LQ9NWX6 298 aaKnown RBP15.16■□□□□ 0.02
VARS-227ENST00000489979 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.16■□□□□ 0.02
VARS-227ENST00000489979 CEP295Q9C0D2 2601 aa15.16■□□□□ 0.02
VARS-227ENST00000489979 DENND4CQ5VZ89 1909 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 TSC2P49815 1807 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 LAMA1P25391 3075 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 XPOTO43592 962 aaKnown RBP15.15■□□□□ 0.02
VARS-227ENST00000489979 ATG13O75143 517 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 ODC1P11926 461 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 CDC25CP30307 473 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 MPLP40238 635 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 LILRA4P59901 499 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 GRSF1Q12849 480 aaKnown RBP eCLIP15.15■□□□□ 0.02
VARS-227ENST00000489979 PTPAQ15257 358 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 ZRSR1Q15695 479 aaKnown RBP15.15■□□□□ 0.02
VARS-227ENST00000489979 IL17AQ16552 155 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 MGAT5BQ3V5L5 792 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 TMEM196Q5HYL7 178 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 CCDC83Q8IWF9 413 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 FBXO18Q8NFZ0 1043 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 OR10T2Q8NGX3 314 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 BICD1Q96G01 975 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 GCNAQ96QF7 691 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 SLC46A2Q9BY10 475 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 HPS4Q9NQG7 708 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 HSFX1Q9UBD0 423 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 KCNG1Q9UIX4 513 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 PCDHGA5Q9Y5G8 931 aa15.15■□□□□ 0.02
VARS-227ENST00000489979 FAM208BQ5VWN6 2430 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 AKAP3O75969 853 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 ATF6P18850 670 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 TUFMP49411 452 aaKnown RBP15.14■□□□□ 0.01
VARS-227ENST00000489979 TOB1P50616 345 aaPredicted RBP15.14■□□□□ 0.01
VARS-227ENST00000489979 RUNX3Q13761 415 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 VEPH1Q14D04 833 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 ENOX2Q16206 610 aaKnown RBP15.14■□□□□ 0.01
VARS-227ENST00000489979 SLC39A12Q504Y0 691 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 RNF43Q68DV7 783 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 TRIM68Q6AZZ1 485 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 TCEAL6Q6IPX3 200 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 GIPC2Q8TF65 315 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 TCEAL3Q969E4 200 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 CHFRQ96EP1 664 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 ZC3H10Q96K80 434 aaKnown RBP15.14■□□□□ 0.01
VARS-227ENST00000489979 FAM83CQ9BQN1 747 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 EBF3Q9H4W6 596 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 RPF1Q9H9Y2 349 aaKnown RBP15.14■□□□□ 0.01
VARS-227ENST00000489979 VPS45Q9NRW7 570 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 PCDHB6Q9Y5E3 794 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 SCN1AP35498 2009 aa15.14■□□□□ 0.01
VARS-227ENST00000489979 OTOL1A6NHN0 477 aaPredicted RBP15.13■□□□□ 0.01
VARS-227ENST00000489979 TRDMT1O14717 391 aaKnown RBP15.13■□□□□ 0.01
VARS-227ENST00000489979 RNF40O75150 1001 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 EGFP01133 1207 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms