RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 PDCD4Q53EL6 469 aaKnown RBP3.43□□□□□ -1.86
CALD1-221ENST00000489019 CCDC181Q5TID7 509 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 EFCAB12Q6NXP0 572 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 CASC1Q6TDU7 716 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 LRRC55Q6ZSA7 311 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 KRT28Q7Z3Y7 464 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 VRK3Q8IV63 474 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 HSCBQ8IWL3 235 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 RPAP2Q8IXW5 612 aaPredicted RBP3.43□□□□□ -1.86
CALD1-221ENST00000489019 SMC5Q8IY18 1101 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.43□□□□□ -1.86
CALD1-221ENST00000489019 IP6K1Q92551 441 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 JADE3Q92613 823 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 CHFRQ96EP1 664 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 DCLRE1CQ96SD1 692 aaKnown RBP3.43□□□□□ -1.86
CALD1-221ENST00000489019 UHRF1Q96T88 793 aaPredicted RBP3.43□□□□□ -1.86
CALD1-221ENST00000489019 MYOCQ99972 504 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 ADI1Q9BV57 179 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 SLC46A2Q9BY10 475 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 C22orf23Q9BZE7 217 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 DKK2Q9UBU2 259 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 SLC23A1Q9UHI7 598 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 TUBD1Q9UJT1 453 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 AJAP1Q9UKB5 411 aaPredicted RBP3.43□□□□□ -1.86
CALD1-221ENST00000489019 FZD1Q9UP38 647 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 CLCA2Q9UQC9 943 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 PCDHGA9Q9Y5G4 932 aaKnown RBP3.43□□□□□ -1.86
CALD1-221ENST00000489019 PCDHGA8Q9Y5G5 932 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 PCDHGA7Q9Y5G6 932 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 PCDHGA6Q9Y5G7 932 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 PCDHGA3Q9Y5H0 932 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 RGPD1P0DJD0 1748 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 CRB1P82279 1406 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 MSH6P52701 1360 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 CENPVL1A0A0U1RR11 272 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 GABRDO14764 452 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 KATNA1O75449 491 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 MAP4K4O95819 1239 aaPredicted RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 MT-CO1P00395 513 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 GCP02774 474 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 AMY1AP04745 511 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 GNAI3P08754 354 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 SNRPA1P09661 255 aaKnown RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 RBP3P10745 1247 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 MGAT1P26572 445 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 DEKP35659 375 aaKnown RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 GUCY2FP51841 1108 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 CHN2P52757 468 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 PER3P56645 1201 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 RAP2BP61225 183 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 ABCB5Q2M3G0 1257 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 BEAN1Q3B7T3 259 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 AMOTQ4VCS5 1084 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 ATXN7L2Q5T6C5 722 aaPredicted RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 SYDE2Q5VT97 1194 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 ZNF530Q6P9A1 599 aaPredicted RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 PGM2L1Q6PCE3 622 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 ZGPATQ8N5A5 531 aaKnown RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 PPM1NQ8N819 430 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 ANKRD44Q8N8A2 993 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 PRPF38AQ8NAV1 312 aaKnown RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 ZFP28Q8NHY6 868 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 PROKR1Q8TCW9 393 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 CCHCR1Q8TD31 782 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 STAG1Q8WVM7 1258 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 NRG4Q8WWG1 115 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 JDP2Q8WYK2 163 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 DPF2Q92785 391 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 LRRC59Q96AG4 307 aaKnown RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 FAM193BQ96PV7 902 aaPredicted RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 PSMD1Q99460 953 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 MRI1Q9BV20 369 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 SENP6Q9GZR1 1112 aaPredicted RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 AKIP1Q9NQ31 210 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 LANCL2Q9NS86 450 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 BABAM1Q9NWV8 329 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 TRHDEQ9UKU6 1024 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 ZBTB21Q9ULJ3 1066 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 DNM3Q9UQ16 869 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 USP15Q9Y4E8 981 aaPredicted RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 ACTL7AQ9Y615 435 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 LTN1O94822 1766 aa3.42□□□□□ -1.86
CALD1-221ENST00000489019 SOS1Q07889 1333 aaPredicted RBP3.42□□□□□ -1.86
CALD1-221ENST00000489019 KDRP35968 1356 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 USP54Q70EL1 1684 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 TMEM200CA6NKL6 621 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 DIRC3C9JPN6 131 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 RNMTO43148 476 aaKnown RBP3.41□□□□□ -1.86
CALD1-221ENST00000489019 PEX14O75381 377 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 ENDOD1O94919 500 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 PRSS23O95084 383 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 ABHD16AO95870 558 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 GNAI2P04899 355 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 HSP90AA1P07900 732 aaKnown RBP3.41□□□□□ -1.86
CALD1-221ENST00000489019 HSP90AB1P08238 724 aaKnown RBP3.41□□□□□ -1.86
CALD1-221ENST00000489019 PDGFRBP09619 1106 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 RAP2AP10114 183 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 LAG3P18627 525 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 C5AR1P21730 350 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 INHBCP55103 352 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms