RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 PKN3Q6P5Z2 889 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 PRSS55Q6UWB4 352 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 ZPBP2Q6X784 338 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 USP49Q70CQ1 688 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 MTSS1LQ765P7 747 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 CEP68Q76N32 757 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 HAUS6Q7Z4H7 955 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 WDR5BQ86VZ2 330 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 MYCT1Q8N699 235 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 CEP120Q8N960 986 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 DEFB124Q8NES8 71 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 HDAC7Q8WUI4 952 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 RABGGTAQ92696 567 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 KCNN1Q92952 543 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 LRIG1Q96JA1 1093 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 CLIC6Q96NY7 704 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 PPP1R10Q96QC0 940 aaKnown RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 USP28Q96RU2 1077 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 PAAF1Q9BRP4 392 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 TCHPQ9BT92 498 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 EDEM2Q9BV94 578 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 GPR62Q9BZJ7 368 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 CXCL16Q9H2A7 254 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 PLEKHA4Q9H4M7 779 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 PARVGQ9HBI0 331 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 CHST7Q9NS84 486 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 FNIP2Q9P278 1114 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 ANKFY1Q9P2R3 1169 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 DNMT3BQ9UBC3 853 aaKnown RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 STK17AQ9UEE5 414 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 CCDC39Q9UFE4 941 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 NEUROG3Q9Y4Z2 214 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 ZFP37Q9Y6Q3 630 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 RELNP78509 3460 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 PTPRBP23467 1997 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 SMIM28A0A1B0GU29 152 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 LNP1A1A4G5 178 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 PATE3B3GLJ2 98 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 TMEM189-UBE2V1I3L0A0 370 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 K7ENM7 598 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 SNPHO15079 494 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 CLDN3O15551 220 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 TRAK2O60296 914 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 FOXD2O60548 495 aaPredicted RBP7□□□□□ -1.29
CTDSPL-208ENST00000486978 ECI2O75521 394 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 C1RP00736 705 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 HARSP12081 509 aaKnown RBP7□□□□□ -1.29
CTDSPL-208ENST00000486978 IGFBP6P24592 240 aaPredicted RBP7□□□□□ -1.29
CTDSPL-208ENST00000486978 CCNE1P24864 410 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 ABCD1P33897 745 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 CNR2P34972 360 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 DDIT3P35638 169 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 MPLP40238 635 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 SOX9P48436 509 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 OSTNP61366 133 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 FAM193AP78312 1265 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 CREMQ03060 361 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 MCL1Q07820 350 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 ELAVL2Q12926 359 aaKnown RBP7□□□□□ -1.29
CTDSPL-208ENST00000486978 STK38Q15208 465 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 XKR4Q5GH76 650 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 GLRA4Q5JXX5 417 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 RRAGBQ5VZM2 374 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 ELMSAN1Q6PJG2 1045 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 ALKAL1Q6UXT8 129 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 KRI1Q8N9T8 703 aaKnown RBP7□□□□□ -1.29
CTDSPL-208ENST00000486978 LINC00301Q8NCQ3 95 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 GLIS3Q8NEA6 775 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 HASPINQ8TF76 798 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 FAM3CQ92520 227 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 BICD1Q96G01 975 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 ZBTB45Q96K62 511 aaPredicted RBP7□□□□□ -1.29
CTDSPL-208ENST00000486978 UROC1Q96N76 676 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 ZNF396Q96N95 335 aaPredicted RBP7□□□□□ -1.29
CTDSPL-208ENST00000486978 ACAP3Q96P50 834 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 TTPALQ9BTX7 342 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 ZHX3Q9H4I2 956 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 SLC38A7Q9NVC3 462 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 CNTN3Q9P232 1028 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 DPP7Q9UHL4 492 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 THADAQ6YHU6 1953 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 APC2O95996 2303 aa7□□□□□ -1.29
CTDSPL-208ENST00000486978 USP9XQ93008 2570 aaPredicted RBP7□□□□□ -1.29
CTDSPL-208ENST00000486978 SPAARA0A1B0GVQ0 90 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 FAM221BA6H8Z2 402 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 HNRNPDLO14979 420 aaKnown RBP6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 DCLK1O15075 740 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 SPTLC2O15270 562 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 EXTL3O43909 919 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 PPP6R2O75170 966 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 B3GAT3O94766 335 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 PAPSS2O95340 614 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 YEATS4O95619 227 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 PIGRP01833 764 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 ZSCAN22P10073 491 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 CEACAM1P13688 526 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 KCNE1P15382 129 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 CEBPBP17676 345 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 MATR3P43243 847 aaKnown RBP eCLIP6.99□□□□□ -1.292e-6■■■■□ 23.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms