RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 TMC8Q8IU68 726 aa16.8■□□□□ 0.28
PLXNB3-208ENST00000485980 CALML4Q96GE6 196 aa16.8■□□□□ 0.28
PLXNB3-208ENST00000485980 LSM14BQ9BX40 385 aaKnown RBP16.8■□□□□ 0.28
PLXNB3-208ENST00000485980 PTPRHQ9HD43 1115 aa16.8■□□□□ 0.28
PLXNB3-208ENST00000485980 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
PLXNB3-208ENST00000485980 SLC8A2Q9UPR5 921 aa16.8■□□□□ 0.28
PLXNB3-208ENST00000485980 DNM3Q9UQ16 869 aa16.8■□□□□ 0.28
PLXNB3-208ENST00000485980 SLC27A5Q9Y2P5 690 aa16.8■□□□□ 0.28
PLXNB3-208ENST00000485980 CLIC4Q9Y696 253 aa16.8■□□□□ 0.28
PLXNB3-208ENST00000485980 ATG2BQ96BY7 2078 aa16.8■□□□□ 0.28
PLXNB3-208ENST00000485980 ATRXP46100 2492 aa16.8■□□□□ 0.28
PLXNB3-208ENST00000485980 PHLPP2Q6ZVD8 1323 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 RAP1GAPP47736 663 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 NPTX2P47972 431 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 NUCB2P80303 420 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 FOXD4L6Q3SYB3 417 aaPredicted RBP16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 SEZ6Q53EL9 994 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 ARHGAP15Q53QZ3 475 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 RNF43Q68DV7 783 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 PKN3Q6P5Z2 889 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 FOXD4L3Q6VB84 417 aaPredicted RBP16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 USP37Q86T82 979 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 DNAJC25Q9H1X3 360 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 CRISPLD1Q9H336 500 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 TUBGCP4Q9UGJ1 667 aa16.79■□□□□ 0.28
PLXNB3-208ENST00000485980 KIF26AQ9ULI4 1882 aaPredicted RBP16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 LAMA1P25391 3075 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 C1QTNF9BB2RNN3 333 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 VNN2O95498 520 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 C1QTNF9P0C862 333 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 GABRR2P28476 465 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 CDC25AP30304 524 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 MPLP40238 635 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 IL17AQ16552 155 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 ECM1Q16610 540 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 ITPRIPL2Q3MIP1 535 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 MPZL3Q6UWV2 235 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 GAREM2Q75VX8 874 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 DNAJB7Q7Z6W7 309 aaPredicted RBP16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 TMEM130Q8N3G9 435 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 BEST2Q8NFU1 509 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 BPIFB1Q8TDL5 484 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 ZBTB45Q96K62 511 aaPredicted RBP16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 USP28Q96RU2 1077 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 TMEM209Q96SK2 561 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 TMEM134Q9H6X4 195 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 KMT5AQ9NQR1 393 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 VPS45Q9NRW7 570 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 THG1LQ9NWX6 298 aaKnown RBP16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 CHMP5Q9NZZ3 219 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 ZMIZ1Q9ULJ6 1067 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
PLXNB3-208ENST00000485980 MEFVO15553 781 aaPredicted RBP16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 SLC26A4O43511 780 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 ATG13O75143 517 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 SOAT2O75908 522 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 OAZ2O95190 189 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 NOVA1P51513 510 aaKnown RBP16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 PLCB2Q00722 1185 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 SPAG1Q07617 926 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 GPR17Q13304 367 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 DMP1Q13316 513 aaPredicted RBP16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 PKP1Q13835 747 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 PTPAQ15257 358 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 SLC10A6Q3KNW5 377 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 PLA2G2CQ5R387 149 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 TCEAL6Q6IPX3 200 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 UNQ6494/PRO21346Q6UXR6 183 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 DSTYKQ6XUX3 929 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 TAS1R3Q7RTX0 852 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 KRI1Q8N9T8 703 aaKnown RBP16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 ATAD1Q8NBU5 361 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 TCEAL3Q969E4 200 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 MKNK1Q9BUB5 465 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 OXCT2Q9BYC2 517 aaPredicted RBP16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 OBP2AQ9NY56 170 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 ANKFY1Q9P2R3 1169 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 CFAP45Q9UL16 551 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 ASB3Q9Y575 518 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 PCDHGA5Q9Y5G8 931 aa16.77■□□□□ 0.28
PLXNB3-208ENST00000485980 CCDC163A0A0D9SF12 145 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 OR6C75A6NL08 312 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 M0QZQ0 153 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 HIP1RO75146 1068 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 PRAMEF12O95522 483 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 FGF19O95750 216 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 PROZP22891 400 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 MATR3P43243 847 aaKnown RBP eCLIP16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 NASPP49321 788 aaPredicted RBP16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 CYP4F8P98187 520 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 GRSF1Q12849 480 aaKnown RBP eCLIP16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 FOXC1Q12948 553 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 ATL3Q6DD88 541 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 CENPPQ6IPU0 288 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 KCTD17Q8N5Z5 321 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 PSMG2Q969U7 264 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 SMG9Q9H0W8 520 aaKnown RBP16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 GKN1Q9NS71 199 aa16.76■□□□□ 0.27
PLXNB3-208ENST00000485980 POLR3BQ9NW08 1133 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms