RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 CERS4Q9HA82 394 aa23.31■■□□□ 1.32
NECAB3-211ENST00000485399 MTCH2Q9Y6C9 303 aa23.31■■□□□ 1.32
NECAB3-211ENST00000485399 MRPL42Q9Y6G3 142 aaKnown RBP23.31■■□□□ 1.32
NECAB3-211ENST00000485399 COL4A4P53420 1690 aaPredicted RBP23.31■■□□□ 1.32
NECAB3-211ENST00000485399 ADKP55263 362 aaKnown RBP23.3■■□□□ 1.32
NECAB3-211ENST00000485399 TIGD5Q53EQ6 642 aa23.3■■□□□ 1.32
NECAB3-211ENST00000485399 MICALL1Q8N3F8 863 aa23.3■■□□□ 1.32
NECAB3-211ENST00000485399 APPL2Q8NEU8 664 aa23.3■■□□□ 1.32
NECAB3-211ENST00000485399 SUSD3Q96L08 255 aa23.3■■□□□ 1.32
NECAB3-211ENST00000485399 ZNF558Q96NG5 402 aa23.3■■□□□ 1.32
NECAB3-211ENST00000485399 ARID3AQ99856 593 aa23.3■■□□□ 1.32
NECAB3-211ENST00000485399 AAASQ9NRG9 546 aa23.3■■□□□ 1.32
NECAB3-211ENST00000485399 ADAM28Q9UKQ2 775 aa23.3■■□□□ 1.32
NECAB3-211ENST00000485399 LRRC53A6NM62 1247 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 F8VZ95 297 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 PTMAP06454 111 aaKnown RBP23.29■■□□□ 1.32
NECAB3-211ENST00000485399 WEE2P0C1S8 567 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 IGFBP6P24592 240 aaPredicted RBP23.29■■□□□ 1.32
NECAB3-211ENST00000485399 SOX5P35711 763 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 ARID5BQ14865 1188 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 SFMBT2Q5VUG0 894 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 KCNT2Q6UVM3 1135 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 CCDC186Q7Z3E2 898 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 LIMS2Q7Z4I7 341 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 TC2NQ8N9U0 490 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 SP7Q8TDD2 431 aaPredicted RBP23.29■■□□□ 1.32
NECAB3-211ENST00000485399 HASPINQ8TF76 798 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 SYN2Q92777 582 aaPredicted RBP23.29■■□□□ 1.32
NECAB3-211ENST00000485399 GPR88Q9GZN0 384 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 SMYD3Q9H7B4 428 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 CISHQ9NSE2 258 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 PCDHB4Q9Y5E5 795 aa23.29■■□□□ 1.32
NECAB3-211ENST00000485399 TCF20Q9UGU0 1960 aaKnown RBP23.29■■□□□ 1.32
NECAB3-211ENST00000485399 M0QZQ0 153 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 FOXN3O00409 490 aaPredicted RBP23.28■■□□□ 1.32
NECAB3-211ENST00000485399 TACC1O75410 805 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 ITGB1P05556 798 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 ODC1P11926 461 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 ACO1P21399 889 aaKnown RBP23.28■■□□□ 1.32
NECAB3-211ENST00000485399 BRCC3P46736 316 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 SOWAHAQ2M3V2 549 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 SPRED2Q7Z698 418 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 TMEM86AQ8N2M4 240 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 UBR7Q8N806 425 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 DNAJC7Q99615 494 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 SDCBP2Q9H190 292 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 ABHD10Q9NUJ1 306 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 MARCH5Q9NX47 278 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 DSEQ9UL01 958 aa23.28■■□□□ 1.32
NECAB3-211ENST00000485399 CCDC172P0C7W6 258 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 USP8P40818 1118 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 RAP1GAPP47736 663 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 CDH8P55286 799 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 TFF2Q03403 129 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 GOLGA8FQ08AF8 430 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 GOLGA8DPQ0D2H9 430 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 ELAVL2Q12926 359 aaKnown RBP23.27■■□□□ 1.32
NECAB3-211ENST00000485399 FAM71AQ8IYT1 594 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 COLGALT1Q8NBJ5 622 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 SPATA18Q8TC71 538 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 PANX2Q96RD6 677 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 UHRF1Q96T88 793 aaPredicted RBP23.27■■□□□ 1.32
NECAB3-211ENST00000485399 ZNHIT6Q9NWK9 470 aaKnown RBP23.27■■□□□ 1.32
NECAB3-211ENST00000485399 AIPL1Q9NZN9 384 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 PCDHB8Q9UN66 801 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 L1RE1Q9UN81 338 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 CNTN6Q9UQ52 1028 aa23.27■■□□□ 1.32
NECAB3-211ENST00000485399 NT5C1B-RDH14C9J2C7 533 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 F8W810 466 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 BMP1P13497 986 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 KRT5P13647 590 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 FERP16591 822 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 CD58P19256 250 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 HNRNPH3P31942 346 aaKnown RBP23.27■■□□□ 1.31
NECAB3-211ENST00000485399 INCA1Q0VD86 236 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 METTL23Q86XA0 190 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 ADGRF2Q8IZF7 708 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 PDCL2Q8N4E4 241 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 CLP1Q92989 425 aaKnown RBP23.27■■□□□ 1.31
NECAB3-211ENST00000485399 IGSF21Q96ID5 467 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 DNAI2Q9GZS0 605 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 SNX25Q9H3E2 840 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 SPG21Q9NZD8 308 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 BARX2Q9UMQ3 279 aaPredicted RBP23.27■■□□□ 1.31
NECAB3-211ENST00000485399 PCDHB12Q9Y5F1 795 aa23.27■■□□□ 1.31
NECAB3-211ENST00000485399 KIAA1671Q9BY89 1806 aa23.26■■□□□ 1.31
NECAB3-211ENST00000485399 SF3B1O75533 1304 aaKnown RBP eCLIP23.26■■□□□ 1.316e-6■■■■■ 96.6
NECAB3-211ENST00000485399 LCHNA4D1U4 455 aa23.26■■□□□ 1.31
NECAB3-211ENST00000485399 GFPT2O94808 682 aa23.26■■□□□ 1.31
NECAB3-211ENST00000485399 TYMPP19971 482 aa23.26■■□□□ 1.31
NECAB3-211ENST00000485399 WARSP23381 471 aaKnown RBP23.26■■□□□ 1.31
NECAB3-211ENST00000485399 PPM1AP35813 382 aa23.26■■□□□ 1.31
NECAB3-211ENST00000485399 PBX3P40426 434 aa23.26■■□□□ 1.31
NECAB3-211ENST00000485399 ASIC2Q16515 512 aa23.26■■□□□ 1.31
NECAB3-211ENST00000485399 FUT10Q6P4F1 479 aa23.26■■□□□ 1.31
NECAB3-211ENST00000485399 TMEM270Q6UE05 265 aa23.26■■□□□ 1.31
NECAB3-211ENST00000485399 SLC39A11Q8N1S5 342 aa23.26■■□□□ 1.31
NECAB3-211ENST00000485399 ARNTL2Q8WYA1 636 aa23.26■■□□□ 1.31
NECAB3-211ENST00000485399 MRPL45Q9BRJ2 306 aaKnown RBP23.26■■□□□ 1.31
NECAB3-211ENST00000485399 I3L4J1 428 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms