RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 KRT13P13646 458 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 NR1H2P55055 460 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SNAP25P60880 206 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 CDC42EP1Q00587 391 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 CDC16Q13042 620 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PKN1Q16512 942 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 KIAA0753Q2KHM9 967 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PKDCCQ504Y2 493 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 WDR44Q5JSH3 913 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 TMEM63BQ5T3F8 832 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF619Q8N2I2 560 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PCYOX1LQ8NBM8 494 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SLC30A5Q8TAD4 765 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SLC7A14Q8TBB6 771 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PLVAPQ9BX97 442 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 TRPV6Q9H1D0 765 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SMARCAD1Q9H4L7 1026 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF576Q9H609 170 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 IFT22Q9H7X7 185 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ARFGAP3Q9NP61 516 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 UBN1Q9NPG3 1134 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 TBC1D29Q9UFV1 150 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SEC63Q9UGP8 760 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 USP20Q9Y2K6 914 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SLC12A7Q9Y666 1083 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SART1O43290 800 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 TFE3P19532 575 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 TTC3P53804 2025 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 CSE1LP55060 971 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 FAM189BP81408 668 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 EIF2B5Q13144 721 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 LY6KQ17RY6 165 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 MUM1Q2TAK8 710 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF484Q5JVG2 852 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PGM2L1Q6PCE3 622 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 BLOC1S3Q6QNY0 202 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 CRTC1Q6UUV9 634 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ABHD15Q6UXT9 468 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 HERC6Q8IVU3 1022 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 CCDC170Q8IYT3 715 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 IL31RAQ8NI17 732 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ZSCAN18Q8TBC5 510 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SEPT1Q8WYJ6 367 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 MS4A3Q96HJ5 214 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 RIT2Q99578 217 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 CDC6Q99741 560 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 BAG1Q99933 345 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PSTPIP2Q9H939 334 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 TRIM39Q9HCM9 518 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 BRMS1Q9HCU9 246 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PAPOLBQ9NRJ5 636 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PLSCR4Q9NRQ2 329 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 TOMM22Q9NS69 142 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 INTS7Q9NVH2 962 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF215Q9UL58 517 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SNX14Q9Y5W7 946 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 IGSF9BQ9UPX0 1349 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 C17orf102A2RUQ5 167 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 FAM86C2PA6NEL3 165 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 INPPL1O15357 1258 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 EDIL3O43854 480 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 MMEP08473 750 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 MSL3P1P0C860 447 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ITGB5P18084 799 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PBLDP30039 288 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 HOXC12P31275 282 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 GRIK1P39086 918 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PIK3CBP42338 1070 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 LIG3P49916 1009 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 WDR5P61964 334 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PPARDQ03181 441 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SURF1Q15526 300 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 DNTTIP2Q5QJE6 756 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 MARCH8Q5T0T0 291 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SWT1Q5T5J6 900 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 HGSNATQ68CP4 663 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 LIN54Q6MZP7 749 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ALKBH5Q6P6C2 394 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 CNSTQ6PJW8 725 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 NUP54Q7Z3B4 507 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 NXPE1Q8N323 547 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 BRSK1Q8TDC3 778 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ARHGEF2Q92974 986 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 FAM81BQ96LP2 452 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PCYT2Q99447 389 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 RAD9AQ99638 391 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 FTHL17Q9BXU8 183 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ARHGEF4Q9NR80 690 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 IRAK4Q9NWZ3 460 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 CCDC39Q9UFE4 941 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHA6Q9UN73 950 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 YBX2Q9Y2T7 364 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 GPSM3Q9Y4H4 160 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHA8Q9Y5H6 950 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ZBTB43O43298 467 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 GOSR1O95249 250 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 IPO7O95373 1038 aaKnown RBP5.72□□□□□ -1.49
CCDC39-205ENST00000485055 GGPS1O95749 300 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 SMIM10L2AP0DMW4 78 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 SMIM10L2BP0DMW5 78 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms