RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 MIF4GDA9UHW6 222 aaKnown RBP14.94□□□□□ -0.02
CLK3-204ENST00000483723 KCNK3O14649 394 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 TLR3O15455 904 aaKnown RBP14.94□□□□□ -0.02
CLK3-204ENST00000483723 ZNF623O75123 536 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
CLK3-204ENST00000483723 CTSHP09668 335 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 VDRP11473 427 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 LRPAP1P30533 357 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 GLRA4Q5JXX5 417 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 LIN9Q5TKA1 542 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 LIMS2Q7Z4I7 341 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 PASD1Q8IV76 773 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 PPP1R10Q96QC0 940 aaKnown RBP14.94□□□□□ -0.02
CLK3-204ENST00000483723 PARD6BQ9BYG5 372 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 OSBPL7Q9BZF2 842 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 TRMT13Q9NUP7 481 aaKnown RBP14.94□□□□□ -0.02
CLK3-204ENST00000483723 GDAP2Q9NXN4 497 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 CHORDC1Q9UHD1 332 aaPredicted RBP14.94□□□□□ -0.02
CLK3-204ENST00000483723 TMEM59LQ9UK28 342 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 RAB21Q9UL25 225 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 PTGESO14684 152 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 TUBBP07437 444 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 COMTP21964 271 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 NFX1Q12986 1120 aaKnown RBP14.93□□□□□ -0.02
CLK3-204ENST00000483723 MESDQ14696 234 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 CNGA2Q16280 664 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 CCDC181Q5TID7 509 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 FBXO38Q6PIJ6 1188 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 USP38Q8NB14 1042 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 GSTCDQ8NEC7 633 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 WNT8AQ9H1J5 351 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 EHD2Q9NZN4 543 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 HMGXB4Q9UGU5 601 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 PADI3Q9ULW8 664 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 PTCH2Q9Y6C5 1203 aa14.93□□□□□ -0.02
CLK3-204ENST00000483723 ATF7P17544 494 aaPredicted RBP14.92□□□□□ -0.02
CLK3-204ENST00000483723 CTNNA2P26232 953 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 SSTR3P32745 418 aaPredicted RBP14.92□□□□□ -0.02
CLK3-204ENST00000483723 PNPLA4P41247 253 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 PEX5P50542 639 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 NDST1P52848 882 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 RBM10P98175 930 aaKnown RBP14.92□□□□□ -0.02
CLK3-204ENST00000483723 SOX4Q06945 474 aaPredicted RBP14.92□□□□□ -0.02
CLK3-204ENST00000483723 MAMLD1Q13495 774 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 LPIN1Q14693 890 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 DENND1BQ6P3S1 775 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 TRAF7Q6Q0C0 670 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 C11orf70Q9BRQ4 267 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 CARD9Q9H257 536 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 MRPL47Q9HD33 250 aaKnown RBP14.92□□□□□ -0.02
CLK3-204ENST00000483723 SMARCAL1Q9NZC9 954 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 PHF24Q9UPV7 400 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 GIT1Q9Y2X7 761 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 A0A1W2PQ45 241 aaPredicted RBP14.92□□□□□ -0.02
CLK3-204ENST00000483723 A0A1W2PQY0 241 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 CALB1P05937 261 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 FAM163BP0C2L3 166 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 ITGA4P13612 1032 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 CD19P15391 556 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 C2orf54Q08AI8 447 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 MMS22LQ6ZRQ5 1243 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 UNC93AQ86WB7 457 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 HACE1Q8IYU2 909 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 C1orf131Q8NDD1 294 aaKnown RBP14.92□□□□□ -0.02
CLK3-204ENST00000483723 NT5C1AQ9BXI3 368 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 SEZ6LQ9BYH1 1024 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.92□□□□□ -0.02
CLK3-204ENST00000483723 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.92□□□□□ -0.02
CLK3-204ENST00000483723 SNX9Q9Y5X1 595 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 SCINQ9Y6U3 715 aa14.92□□□□□ -0.02
CLK3-204ENST00000483723 TARSL2A2RTX5 802 aaKnown RBP14.91□□□□□ -0.02
CLK3-204ENST00000483723 O00370 1275 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 CEP104O60308 925 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 MGEA5O60502 916 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 CD52P31358 61 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 SLC1A1P43005 524 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 DNA2P51530 1060 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 GSCP56915 257 aaPredicted RBP14.91□□□□□ -0.02
CLK3-204ENST00000483723 PTPROQ16827 1216 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 SOWAHAQ2M3V2 549 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 C2CD6Q53TS8 623 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 ZNF618Q5T7W0 954 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 DCAF12L1Q5VU92 463 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 AGMOQ6ZNB7 445 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 PDCL2Q8N4E4 241 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 ALG3Q92685 438 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 BTBD6Q96KE9 485 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 ZNF560Q96MR9 790 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.91□□□□□ -0.022e-8■■■□□ 17.6
CLK3-204ENST00000483723 MRPL45Q9BRJ2 306 aaKnown RBP14.91□□□□□ -0.02
CLK3-204ENST00000483723 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.91□□□□□ -0.022e-7■■■■□ 23.4
CLK3-204ENST00000483723 RNF19AQ9NV58 838 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 PARVAQ9NVD7 372 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 ANAPC7Q9UJX3 599 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 CEP83Q9Y592 693 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 NME7Q9Y5B8 376 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 PCDHA3Q9Y5H8 950 aa14.91□□□□□ -0.02
CLK3-204ENST00000483723 A0A0U1RQF3 1178 aa14.9□□□□□ -0.02
CLK3-204ENST00000483723 A0A0U1RQG5 324 aaPredicted RBP14.9□□□□□ -0.02
CLK3-204ENST00000483723 CCDC66A2RUB6 948 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms