RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 CATSPERGQ6ZRH7 1159 aa16.23■□□□□ 0.19
C9orf3-218ENST00000482056 TDRPQ86YL5 185 aa16.23■□□□□ 0.19
C9orf3-218ENST00000482056 CYP4X1Q8N118 509 aa16.23■□□□□ 0.19
C9orf3-218ENST00000482056 MCEEQ96PE7 176 aa16.23■□□□□ 0.19
C9orf3-218ENST00000482056 CAMKK2Q96RR4 588 aa16.23■□□□□ 0.19
C9orf3-218ENST00000482056 ECT2Q9H8V3 914 aa16.23■□□□□ 0.19
C9orf3-218ENST00000482056 MLXIPLQ9NP71 852 aa16.23■□□□□ 0.19
C9orf3-218ENST00000482056 KLHL11Q9NVR0 708 aa16.23■□□□□ 0.19
C9orf3-218ENST00000482056 DNPEPQ9ULA0 475 aa16.23■□□□□ 0.19
C9orf3-218ENST00000482056 A0A1B0GUA9 196 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 EGFRP00533 1210 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 ASS1P00966 412 aaKnown RBP16.22■□□□□ 0.19
C9orf3-218ENST00000482056 RPL7AP62424 266 aaKnown RBP16.22■□□□□ 0.19
C9orf3-218ENST00000482056 EN1Q05925 392 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-218ENST00000482056 GPS1Q13098 491 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 TFDP3Q5H9I0 405 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 MFSD7Q6UXD7 560 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 CEP57Q86XR8 500 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 MICALL2Q8IY33 904 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 UBR7Q8N806 425 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 CHST13Q8NET6 341 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 NCAPGQ9BPX3 1015 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 MRPL4Q9BYD3 311 aaKnown RBP16.22■□□□□ 0.19
C9orf3-218ENST00000482056 NIF3L1Q9GZT8 377 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 RXFP1Q9HBX9 757 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 CETPP11597 493 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 KRT10P13645 584 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 VCPP55072 806 aaKnown RBP16.22■□□□□ 0.19
C9orf3-218ENST00000482056 YWHAEP62258 255 aaKnown RBP16.22■□□□□ 0.19
C9orf3-218ENST00000482056 SP2Q02086 613 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 MPP2Q14168 576 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 NEDD9Q14511 834 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 MTFR1Q15390 333 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 ZKSCAN8Q15776 578 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-218ENST00000482056 GALNTL6Q49A17 601 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 WLSQ5T9L3 541 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 RNF43Q68DV7 783 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 CENPUQ71F23 418 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 ANKS1BQ7Z6G8 1248 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 PCGF5Q86SE9 256 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 TBC1D1Q86TI0 1168 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-218ENST00000482056 TCHPQ9BT92 498 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 EURLQ9NYK6 297 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 STRIP2Q9ULQ0 834 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 SMG5Q9UPR3 1016 aaKnown RBP16.22■□□□□ 0.19
C9orf3-218ENST00000482056 SHOC2Q9UQ13 582 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 PPME1Q9Y570 386 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 IVNS1ABPQ9Y6Y0 642 aa16.22■□□□□ 0.19
C9orf3-218ENST00000482056 GH1P01241 217 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 ITGAVP06756 1048 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 SLC18A1P54219 525 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 TRPC3Q13507 836 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 CAPSQ13938 189 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 SGSM1Q2NKQ1 1148 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 SAMD7Q7Z3H4 446 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 PNMA8AQ86V59 439 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-218ENST00000482056 ERICH1Q86X53 443 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 NIPA2Q8N8Q9 360 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 TCP11Q8WWU5 503 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 MAML1Q92585 1016 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 NKD2Q969F2 451 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-218ENST00000482056 FRMD8P1Q9BZ68 369 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-218ENST00000482056 VPS37BQ9H9H4 285 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 NOD2Q9HC29 1040 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 PCDH9Q9HC56 1237 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 PRKAG3Q9UGI9 489 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 BAIAP2L1Q9UHR4 511 aa16.21■□□□□ 0.19
C9orf3-218ENST00000482056 hCG_1818297A0A087WSY0 165 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 IGKV6D-21A0A0A0MT36 114 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 LRRD1A4D1F6 860 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 PRPF4O43172 522 aaKnown RBP eCLIP16.2■□□□□ 0.18
C9orf3-218ENST00000482056 TOM1L1O75674 476 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 NQO1P15559 274 aaKnown RBP16.2■□□□□ 0.18
C9orf3-218ENST00000482056 EIF4BP23588 611 aaKnown RBP16.2■□□□□ 0.18
C9orf3-218ENST00000482056 POLR2BP30876 1174 aaKnown RBP16.2■□□□□ 0.18
C9orf3-218ENST00000482056 GMPSP49915 693 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-218ENST00000482056 NCALDP61601 193 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 PLCB3Q01970 1234 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 BNIP1Q12981 228 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 ACVR2BQ13705 512 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 SPARCL1Q14515 664 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 DUOXA2Q1HG44 320 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 ATP13A4Q4VNC1 1196 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 SEPT14Q6ZU15 432 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 TRABD2AQ86V40 505 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 GIMAP7Q8NHV1 300 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 SMC6Q96SB8 1091 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 PITPNM3Q9BZ71 974 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 FHDC1Q9C0D6 1143 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-218ENST00000482056 SGK1O00141 431 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 PECAM1P16284 738 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-218ENST00000482056 KRT15P19012 456 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 BRD2P25440 801 aaKnown RBP16.2■□□□□ 0.18
C9orf3-218ENST00000482056 GSCP56915 257 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-218ENST00000482056 CCDC15Q0P6D6 951 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
C9orf3-218ENST00000482056 GPAT2Q6NUI2 795 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 POLNQ7Z5Q5 900 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 KLHL29Q96CT2 875 aa16.2■□□□□ 0.18
C9orf3-218ENST00000482056 FAM167AQ96KS9 214 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms