RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 SENP8Q96LD8 212 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 TGS1Q96RS0 853 aaKnown RBP12.4□□□□□ -0.42
HPS4-212ENST00000481910 LSM14BQ9BX40 385 aaKnown RBP12.4□□□□□ -0.42
HPS4-212ENST00000481910 GPR62Q9BZJ7 368 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 UBE2TQ9NPD8 197 aaPredicted RBP12.4□□□□□ -0.42
HPS4-212ENST00000481910 SF3B1O75533 1304 aaKnown RBP eCLIP12.4□□□□□ -0.42
HPS4-212ENST00000481910 HUS1O60921 280 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 FGF18O76093 207 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 DNAJB2P25686 324 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 MSNP26038 577 aaKnown RBP12.39□□□□□ -0.43
HPS4-212ENST00000481910 AARSP49588 968 aaKnown RBP eCLIP12.39□□□□□ -0.43
HPS4-212ENST00000481910 ZNF75DP51815 510 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 CBX1P83916 185 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 ELAVL2Q12926 359 aaKnown RBP12.39□□□□□ -0.43
HPS4-212ENST00000481910 PPP2R2DQ66LE6 453 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 RRAGAQ7L523 313 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 SPRED2Q7Z698 418 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 CCDC91Q7Z6B0 441 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 CEP57Q86XR8 500 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 KLHL23Q8NBE8 558 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 APPL2Q8NEU8 664 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 SUSD3Q96L08 255 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 PLVAPQ9BX97 442 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 NIF3L1Q9GZT8 377 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 SIX2Q9NPC8 291 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 PLCB1Q9NQ66 1216 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 APEX2Q9UBZ4 518 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 POLIQ9UNA4 740 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 M0QZQ0 153 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 SOWAHAQ2M3V2 549 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 LRIT3Q3SXY7 679 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 KLHDC7AQ5VTJ3 777 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 FAM171A1Q5VUB5 890 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 GJB7Q6PEY0 223 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 SCARA5Q6ZMJ2 495 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 ARHGEF19Q8IW93 802 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 NEK11Q8NG66 645 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 SAMD11Q96NU1 681 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 SUFUQ9UMX1 484 aa12.39□□□□□ -0.43
HPS4-212ENST00000481910 TIMM13Q9Y5L4 95 aaPredicted RBP12.39□□□□□ -0.43
HPS4-212ENST00000481910 ARHGEF37A1IGU5 675 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 ADCY5O95622 1261 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 RB1P06400 928 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 WEE2P0C1S8 567 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 SETSIPP0DME0 302 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 ODC1P11926 461 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 UCHL3P15374 230 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 TRIM21P19474 475 aaKnown RBP12.38□□□□□ -0.43
HPS4-212ENST00000481910 TBXAS1P24557 533 aaPredicted RBP12.38□□□□□ -0.43
HPS4-212ENST00000481910 PBX1P40424 430 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 ASPAP45381 313 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 GSCP56915 257 aaPredicted RBP12.38□□□□□ -0.43
HPS4-212ENST00000481910 ERVK-21P61565 698 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 PLCB3Q01970 1234 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 GCNT1Q02742 428 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 CUL2Q13617 745 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 CCDC181Q5TID7 509 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 DPY19L2P1Q6NXN4 242 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 DPH6Q7L8W6 267 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 DDX53Q86TM3 631 aaKnown RBP12.38□□□□□ -0.43
HPS4-212ENST00000481910 TOP6BLQ8N6T0 577 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 TIFAQ96CG3 184 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 MRFAP1L1Q96HT8 127 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 FAXDC2Q96IV6 333 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 CERS4Q9HA82 394 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 ALG13Q9NP73 1137 aaKnown RBP12.38□□□□□ -0.43
HPS4-212ENST00000481910 PUF60Q9UHX1 559 aaKnown RBP12.38□□□□□ -0.43
HPS4-212ENST00000481910 DNAJC12Q9UKB3 198 aa12.38□□□□□ -0.43
HPS4-212ENST00000481910 C5orf67F2Z3F1 127 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 EPHB6O15197 1021 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 NOL4O94818 638 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 RAP1GAPP47736 663 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 MFAP3P55082 362 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 CDH8P55286 799 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 POLR2FP61218 127 aaKnown RBP12.37□□□□□ -0.43
HPS4-212ENST00000481910 WSCD1Q658N2 575 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 SPECC1LQ69YQ0 1117 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 KIAA1841Q6NSI8 718 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 TAS1R1Q7RTX1 841 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 METTL23Q86XA0 190 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 PDCL2Q8N4E4 241 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 KAT5Q92993 513 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 B3GALT6Q96L58 329 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 FAM81BQ96LP2 452 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 C11orf84Q9BUA3 381 aaPredicted RBP12.37□□□□□ -0.43
HPS4-212ENST00000481910 BCO2Q9BYV7 579 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 SMYD3Q9H7B4 428 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 DSEQ9UL01 958 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 PCDHB8Q9UN66 801 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 L1RE1Q9UN81 338 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 RANBP2P49792 3224 aaKnown RBP12.37□□□□□ -0.43
HPS4-212ENST00000481910 SYN3O14994 580 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 EFEMP2O95967 443 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 CD58P19256 250 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 TKTP29401 623 aaKnown RBP12.37□□□□□ -0.43
HPS4-212ENST00000481910 PEX19P40855 299 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 RAPGEF1Q13905 1077 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 ARHGAP44Q17R89 818 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 USP41Q3LFD5 358 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 HSP90B2PQ58FF3 399 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms