RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 PMM2O15305 246 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 ASS1P00966 412 aaKnown RBP13.14□□□□□ -0.31
TRA2B-212ENST00000480461 RPL17P18621 184 aaKnown RBP13.14□□□□□ -0.31
TRA2B-212ENST00000480461 TAF6P49848 677 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 ZXDAP98168 799 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 APBA1Q02410 837 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 KRT31Q15323 416 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 PTPN14Q15678 1187 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 SGSM1Q2NKQ1 1148 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 USP41Q3LFD5 358 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 WSCD1Q658N2 575 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 TMC7Q7Z402 723 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 ADGRD2Q7Z7M1 963 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 CEP57Q86XR8 500 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 TCF25Q9BQ70 676 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 RTP3Q9BQQ7 232 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 TTPALQ9BTX7 342 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 HERC2P3Q9BVR0 1158 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 TSPY26PQ9H489 355 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 VRTNQ9H8Y1 702 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 TLR9Q9NR96 1032 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 RAB20Q9NX57 234 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 TAB2Q9NYJ8 693 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 LIMA1Q9UHB6 759 aaKnown RBP13.14□□□□□ -0.31
TRA2B-212ENST00000480461 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 NME7Q9Y5B8 376 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.14□□□□□ -0.31
TRA2B-212ENST00000480461 PLXNA3P51805 1871 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 SF3B1O75533 1304 aaKnown RBP eCLIP13.13□□□□□ -0.315e-6■■■■■ 39
TRA2B-212ENST00000480461 CARNS1A5YM72 827 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 PER2O15055 1255 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 HCRTO43612 131 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 TRAPPC3O43617 180 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 OAZ2O95190 189 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 STAU1O95793 577 aaKnown RBP13.13□□□□□ -0.31
TRA2B-212ENST00000480461 AFPP02771 609 aaKnown RBP13.13□□□□□ -0.31
TRA2B-212ENST00000480461 CYP11A1P05108 521 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 CNPP09543 421 aaKnown RBP13.13□□□□□ -0.31
TRA2B-212ENST00000480461 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
TRA2B-212ENST00000480461 MTIF2P46199 727 aaKnown RBP13.13□□□□□ -0.31
TRA2B-212ENST00000480461 MXI1P50539 228 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 VCPP55072 806 aaKnown RBP13.13□□□□□ -0.31
TRA2B-212ENST00000480461 CDH8P55286 799 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 KCNMA1Q12791 1236 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 TRPC3Q13507 836 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 WDR72Q3MJ13 1102 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 VWA3BQ502W6 1294 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 PLPP4Q5VZY2 271 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 DSTYKQ6XUX3 929 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 USP37Q86T82 979 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 OSTM1Q86WC4 334 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 PDCL2Q8N4E4 241 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 EHBP1Q8NDI1 1231 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 FBXL13Q8NEE6 735 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 MICAL1Q8TDZ2 1067 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 RIN2Q8WYP3 895 aaPredicted RBP13.13□□□□□ -0.31
TRA2B-212ENST00000480461 MSLNLQ96KJ4 702 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 CLSTN3Q9BQT9 956 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 VPS16Q9H269 839 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 NDST4Q9H3R1 872 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 RXFP1Q9HBX9 757 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 NXF1Q9UBU9 619 aaKnown RBP13.13□□□□□ -0.31
TRA2B-212ENST00000480461 L1RE1Q9UN81 338 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 SNX9Q9Y5X1 595 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 DCHS1Q96JQ0 3298 aa13.13□□□□□ -0.31
TRA2B-212ENST00000480461 SMTNL1A8MU46 457 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 SYN3O14994 580 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 STX10O60499 249 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 SLC9A1P19634 815 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 LMO2P25791 158 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 ATICP31939 592 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 PNPLA4P41247 253 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 PIK3CAP42336 1068 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 GLUD2P49448 558 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 NDUFV1P49821 464 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 COPB1P53618 953 aaKnown RBP13.12□□□□□ -0.31
TRA2B-212ENST00000480461 RBM10P98175 930 aaKnown RBP13.12□□□□□ -0.31
TRA2B-212ENST00000480461 ELAVL2Q12926 359 aaKnown RBP13.12□□□□□ -0.31
TRA2B-212ENST00000480461 MYO1EQ12965 1108 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 ADAM15Q13444 863 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 MAN2A1Q16706 1144 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 SV2CQ496J9 727 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 VARS2Q5ST30 1063 aaKnown RBP13.12□□□□□ -0.31
TRA2B-212ENST00000480461 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-212ENST00000480461 FAM114A1Q8IWE2 563 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 SMRP1Q8NCR6 262 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 FAM200AQ8TCP9 573 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 PIK3R5Q8WYR1 880 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 ASIC4Q96FT7 647 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 NAP1L5Q96NT1 182 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-212ENST00000480461 KLHL5Q96PQ7 755 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 TMEM209Q96SK2 561 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 MRPL45Q9BRJ2 306 aaKnown RBP13.12□□□□□ -0.31
TRA2B-212ENST00000480461 CRACR2AQ9BSW2 395 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 IGFLR1Q9H665 355 aa13.12□□□□□ -0.31
TRA2B-212ENST00000480461 MAGEC2Q9UBF1 373 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-212ENST00000480461 GABRDO14764 452 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms