RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 PLD3Q8IV08 490 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 DYNLL2Q96FJ2 89 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 FOPNLQ96NB1 174 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 RABGEF1Q9UJ41 708 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 TMEM94Q12767 1356 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L15C9J2P7 530 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L13C9JLJ4 530 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L11C9JVI0 530 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L18D6R9N7 530 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L22D6RA61 530 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L17D6RBQ6 530 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L19D6RCP7 530 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CFAP99D6REC4 459 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L20D6RJB6 530 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CST8O60676 142 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CBFA2T3O75081 653 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CTDNEP1O95476 244 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 MYCNP04198 464 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CYP2C9P11712 490 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 KCNA2P16389 499 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 PRDX5P30044 214 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 PNPLA4P41247 253 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L24Q0WX57 530 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 SUSD4Q5VX71 490 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L6PQ6QN14 398 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CCDC80Q76M96 950 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ADCK1Q86TW2 530 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 IQCKQ8N0W5 287 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 SPDYE1Q8NFV5 336 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 GTF3C2Q8WUA4 911 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 FAM213AQ9BRX8 229 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 PRRG3Q9BZD7 231 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 G3BP2Q9UN86 482 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 HPS5Q9UPZ3 1129 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 DRG1Q9Y295 367 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ADGBQ8N7X0 1667 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CNTNAP5Q8WYK1 1306 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L5A8MUK1 530 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 PPEF1O14829 653 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 SNX3O60493 162 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 MYL2P10916 166 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 SLC2A3P11169 496 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 FGFR4P22455 802 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 IL1RL1Q01638 556 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CHRNB3Q05901 458 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 SNRNP35Q16560 246 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 UBE2SQ16763 222 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ACAD10Q6JQN1 1059 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 TAF2Q6P1X5 1199 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 POTEGQ6S5H5 508 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 FAM196AQ6ZSG2 479 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 LEMD2Q8NC56 503 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 SETD9Q8NE22 299 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 OR6P1Q8NGX9 317 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CASKIN2Q8WXE0 1202 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 PRKD2Q9BZL6 878 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ACAD9Q9H845 621 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CDYLQ9Y232 598 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 SETBP1Q9Y6X0 1596 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 KPNA4O00629 521 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CCDC159P0C7I6 412 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 FAM58BPP0C7Q3 252 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 AKT1P31749 480 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 SLC16A2P36021 539 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CASP2P42575 452 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 FOXO4P98177 505 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ACMSDQ8TDX5 336 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 PIGBQ92521 554 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 VPS33AQ96AX1 596 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 DHX35Q9H5Z1 703 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 LRRC40Q9H9A6 602 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 RNF146Q9NTX7 359 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 HEY2Q9UBP5 337 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 MAPRE3Q9UPY8 281 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CAPN6Q9Y6Q1 641 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ZFYVE16Q7Z3T8 1539 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ARHGEF40Q8TER5 1519 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 H3BQF6 201 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SLC16A4O15374 487 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 CYP26A1O43174 497 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SERPINI2O75830 405 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SLC9A1P19634 815 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 RCN1Q15293 331 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 CYTH1Q15438 398 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 IMPG1Q17R60 797 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 TTC23Q5W5X9 447 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 TAB3Q8N5C8 712 aaPredicted RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 C8orf37Q96NL8 207 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 VAT1Q99536 393 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ZNF184Q99676 751 aaPredicted RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 KCNK4Q9NYG8 393 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 LMTK2Q8IWU2 1503 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 MROH7Q68CQ1 1323 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ASB14A6NK59 587 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 CLASP2O75122 1294 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 UBOX5O94941 541 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 WDR47O94967 919 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SERPINE1P05121 402 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 HOXC6P09630 235 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms