RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 CXorf38Q8TB03 319 aa13.8□□□□□ -0.2
SEC13-216ENST00000479868 FAM118BQ9BPY3 351 aa13.8□□□□□ -0.2
SEC13-216ENST00000479868 BCO2Q9BYV7 579 aa13.8□□□□□ -0.2
SEC13-216ENST00000479868 DCLK3Q9C098 648 aa13.8□□□□□ -0.2
SEC13-216ENST00000479868 SDCBP2Q9H190 292 aa13.8□□□□□ -0.2
SEC13-216ENST00000479868 PABPC3Q9H361 631 aaKnown RBP13.8□□□□□ -0.2
SEC13-216ENST00000479868 TUT1Q9H6E5 874 aaKnown RBP13.8□□□□□ -0.2
SEC13-216ENST00000479868 KLHL11Q9NVR0 708 aa13.8□□□□□ -0.2
SEC13-216ENST00000479868 IP6K2Q9UHH9 426 aa13.8□□□□□ -0.2
SEC13-216ENST00000479868 PPFIA4O75335 1185 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 ITGB3P05106 788 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 IVLP07476 585 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 MCF2P10911 925 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 SMPD1P17405 629 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 EIF4BP23588 611 aaKnown RBP13.79□□□□□ -0.2
SEC13-216ENST00000479868 TMOD1P28289 359 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 GBP1P32455 592 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 HPDP32754 393 aaPredicted RBP13.79□□□□□ -0.2
SEC13-216ENST00000479868 CDH5P33151 784 aaPredicted RBP13.79□□□□□ -0.2
SEC13-216ENST00000479868 MAN1A1P33908 653 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 GUCY1A3Q02108 690 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 ZNF667Q5HYK9 610 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 DNAJC24Q6P3W2 148 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 ZNF467Q7Z7K2 595 aaPredicted RBP13.79□□□□□ -0.2
SEC13-216ENST00000479868 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 RNF25Q96BH1 459 aaPredicted RBP13.79□□□□□ -0.2
SEC13-216ENST00000479868 ZNF518BQ9C0D4 1074 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 RABEP2Q9H5N1 569 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 PARP2Q9UGN5 583 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 F8VP50 259 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 ADCY6O43306 1168 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 CD19P15391 556 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 GCLCP48506 637 aaPredicted RBP13.79□□□□□ -0.2
SEC13-216ENST00000479868 LACTBP83111 547 aaPredicted RBP13.79□□□□□ -0.2
SEC13-216ENST00000479868 SKIDA1Q1XH10 827 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 SLC10A6Q3KNW5 377 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 KRT71Q3SY84 523 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 PPP1R15BQ5SWA1 713 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 MARCH8Q5T0T0 291 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 DENND1BQ6P3S1 775 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 RUFY4Q6ZNE9 571 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 ANKRD23Q86SG2 305 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 ERICH1Q86X53 443 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 MAIP1Q8WWC4 291 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 NLRP7Q8WX94 980 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 MAML3Q96JK9 1138 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 OSBPL8Q9BZF1 889 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 SEMA4AQ9H3S1 761 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 BCCIPQ9P287 314 aaKnown RBP eCLIP13.79□□□□□ -0.2
SEC13-216ENST00000479868 TJP2Q9UDY2 1190 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 MTRF1LQ9UGC7 380 aaKnown RBP13.79□□□□□ -0.2
SEC13-216ENST00000479868 HMGXB4Q9UGU5 601 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 CYTH4Q9UIA0 394 aa13.79□□□□□ -0.2
SEC13-216ENST00000479868 COL1A2P08123 1366 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 UNCXA6NJT0 531 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 DCDC2CA8MYV0 355 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 CITO14578 2027 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 RAD23BP54727 409 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 TNFAIP2Q03169 654 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 IFFO1Q0D2I5 559 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 GRB14Q14449 540 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 TRIP13Q15645 432 aaPredicted RBP13.78□□□□□ -0.2
SEC13-216ENST00000479868 EXD1Q8NHP7 514 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 TWNKQ96RR1 684 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 TRIP11Q15643 1979 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 PI4K2BG5E9Z4 385 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 ZEB2O60315 1214 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 ITGBL1O95965 494 aaPredicted RBP13.78□□□□□ -0.2
SEC13-216ENST00000479868 MMP3P08254 477 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 NUDT17P0C025 328 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 FGFR4P22455 802 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 IVDP26440 423 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 YWHAEP62258 255 aaKnown RBP13.78□□□□□ -0.2
SEC13-216ENST00000479868 PPARDQ03181 441 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 ADCY2Q08462 1091 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 SLC29A2Q14542 456 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 GRIK4Q16099 956 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 DUSP28Q4G0W2 176 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 PTPN20Q4JDL3 420 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 TXNRD3NBQ6F5E7 133 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 DCUN1D2Q6PH85 259 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 SCLT1Q96NL6 688 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 PTPN18Q99952 460 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 CWC15Q9P013 229 aaKnown RBP13.78□□□□□ -0.2
SEC13-216ENST00000479868 ASIC3Q9UHC3 531 aa13.78□□□□□ -0.2
SEC13-216ENST00000479868 TSPAN1O60635 241 aa13.77□□□□□ -0.21
SEC13-216ENST00000479868 EIF3BP55884 814 aaKnown RBP13.77□□□□□ -0.21
SEC13-216ENST00000479868 NFX1Q12986 1120 aaKnown RBP13.77□□□□□ -0.21
SEC13-216ENST00000479868 CALCOCO2Q13137 446 aa13.77□□□□□ -0.21
SEC13-216ENST00000479868 GPR162Q16538 588 aa13.77□□□□□ -0.21
SEC13-216ENST00000479868 AGBL2Q5U5Z8 902 aa13.77□□□□□ -0.21
SEC13-216ENST00000479868 DENND2CQ68D51 928 aa13.77□□□□□ -0.21
SEC13-216ENST00000479868 ILDR2Q71H61 639 aa13.77□□□□□ -0.21
SEC13-216ENST00000479868 KIAA0319LQ8IZA0 1049 aa13.77□□□□□ -0.21
SEC13-216ENST00000479868 C3orf20Q8ND61 904 aa13.77□□□□□ -0.21
SEC13-216ENST00000479868 CCDC114Q96M63 670 aa13.77□□□□□ -0.21
SEC13-216ENST00000479868 TINF2Q9BSI4 451 aa13.77□□□□□ -0.21
SEC13-216ENST00000479868 ASB7Q9H672 318 aa13.77□□□□□ -0.21
SEC13-216ENST00000479868 NOVA2Q9UNW9 492 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms