RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 FAM49AQ9H0Q0 323 aaPredicted RBP8.33□□□□□ -1.08
RBM39-230ENST00000476806 ADAMTS10Q9H324 1103 aa8.33□□□□□ -1.08
RBM39-230ENST00000476806 R3HDMLQ9H3Y0 253 aa8.33□□□□□ -1.08
RBM39-230ENST00000476806 AVENQ9NQS1 362 aaPredicted RBP8.33□□□□□ -1.08
RBM39-230ENST00000476806 CNTN3Q9P232 1028 aa8.33□□□□□ -1.08
RBM39-230ENST00000476806 GIT1Q9Y2X7 761 aa8.33□□□□□ -1.08
RBM39-230ENST00000476806 PCDHB4Q9Y5E5 795 aa8.33□□□□□ -1.08
RBM39-230ENST00000476806 GOLGA6L10A0A0M3HER8 536 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 RNF225M0QZC1 329 aaPredicted RBP8.32□□□□□ -1.08
RBM39-230ENST00000476806 FOXN3O00409 490 aaPredicted RBP8.32□□□□□ -1.08
RBM39-230ENST00000476806 NDC80O14777 642 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 THAP12O43422 761 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 MTA2O94776 668 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 ASGR1P07306 291 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 KRT19P08727 400 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 COL6A1P12109 1028 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 CHMP4BP1P59074 171 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 BFSP2Q13515 415 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 GLE1Q53GS7 698 aaKnown RBP8.32□□□□□ -1.08
RBM39-230ENST00000476806 FAM47CQ5HY64 1035 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 C1orf220Q5T0J3 134 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 TWF2Q6IBS0 349 aaKnown RBP8.32□□□□□ -1.08
RBM39-230ENST00000476806 DPY19L2P1Q6NXN4 242 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 FBXO46Q6PJ61 603 aaPredicted RBP8.32□□□□□ -1.08
RBM39-230ENST00000476806 UNC93AQ86WB7 457 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 PARP9Q8IXQ6 854 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 RPUSD2Q8IZ73 545 aaKnown RBP8.32□□□□□ -1.08
RBM39-230ENST00000476806 SLC35F6Q8N357 371 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 C17orf53Q8N3J3 647 aaPredicted RBP8.32□□□□□ -1.08
RBM39-230ENST00000476806 GPR161Q8N6U8 529 aaKnown RBP8.32□□□□□ -1.08
RBM39-230ENST00000476806 SLC30A5Q8TAD4 765 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.32□□□□□ -1.08
RBM39-230ENST00000476806 IPO4Q8TEX9 1081 aaKnown RBP8.32□□□□□ -1.08
RBM39-230ENST00000476806 U2AF1L4Q8WU68 220 aaKnown RBP8.32□□□□□ -1.08
RBM39-230ENST00000476806 DNAJB3Q8WWF6 145 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 RABGGTAQ92696 567 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 APBB2Q92870 758 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 SNX27Q96L92 541 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 UROC1Q96N76 676 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 OSMRQ99650 979 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 HDAC6Q9UBN7 1215 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 AMFRQ9UKV5 643 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 SNX12Q9UMY4 172 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 PCDHGC3Q9UN70 934 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 TELO2Q9Y4R8 837 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 CITO14578 2027 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 DOCK3Q8IZD9 2030 aa8.32□□□□□ -1.08
RBM39-230ENST00000476806 CCDC66A2RUB6 948 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 SOBPA7XYQ1 873 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 CCDC188H7C350 402 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 DNM1LO00429 736 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 ZNF189O75820 626 aaPredicted RBP8.31□□□□□ -1.08
RBM39-230ENST00000476806 SETSIPP0DME0 302 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 CXCL8P10145 99 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 KCNE1P15382 129 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 EN2P19622 333 aaPredicted RBP8.31□□□□□ -1.08
RBM39-230ENST00000476806 RPL9P32969 192 aaKnown RBP8.31□□□□□ -1.08
RBM39-230ENST00000476806 GSCP56915 257 aaPredicted RBP8.31□□□□□ -1.08
RBM39-230ENST00000476806 CYP27A1Q02318 531 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 CENPCQ03188 943 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 PAK2Q13177 524 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 ITGA7Q13683 1181 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 ACAP1Q15027 740 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 RPS6KA1Q15418 735 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 PTGISQ16647 500 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 PTPN21Q16825 1174 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 NBPF20Q3BBV1 942 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 FAM26DQ5JW98 314 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 PRAMEF19Q5SWL8 479 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 ACAD10Q6JQN1 1059 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 TMEM270Q6UE05 265 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 PEX26Q7Z412 305 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 ZDHHC17Q8IUH5 632 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 GLYCTKQ8IVS8 523 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 TMEM86AQ8N2M4 240 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 RBBP8NLQ8NC74 664 aaPredicted RBP8.31□□□□□ -1.08
RBM39-230ENST00000476806 PLEKHO2Q8TD55 490 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.31□□□□□ -1.08
RBM39-230ENST00000476806 ZBTB45Q96K62 511 aaPredicted RBP8.31□□□□□ -1.08
RBM39-230ENST00000476806 TNIP3Q96KP6 325 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 SYT11Q9BT88 431 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 BCO2Q9BYV7 579 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 GPR88Q9GZN0 384 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 WNT8AQ9H1J5 351 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 CARD9Q9H257 536 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 LHX5Q9H2C1 402 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 ACBD3Q9H3P7 528 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 CYLDQ9NQC7 956 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 STARD7Q9NQZ5 370 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 DPP3Q9NY33 737 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 KANSL3Q9P2N6 904 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 DSEQ9UL01 958 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 GABRQQ9UN88 632 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 GINS2Q9Y248 185 aa8.31□□□□□ -1.08
RBM39-230ENST00000476806 REXO2Q9Y3B8 237 aaKnown RBP8.31□□□□□ -1.08
RBM39-230ENST00000476806 LAMA3Q16787 3333 aa8.3□□□□□ -1.08
RBM39-230ENST00000476806 DDX3XO00571 662 aaKnown RBP eCLIP8.3□□□□□ -1.08
RBM39-230ENST00000476806 CYP26A1O43174 497 aa8.3□□□□□ -1.08
RBM39-230ENST00000476806 TREHO43280 583 aa8.3□□□□□ -1.08
RBM39-230ENST00000476806 ADCY6O43306 1168 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms