RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 SFI1A8K8P3 1242 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 WIPF1O43516 503 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 NDUFS6O75380 124 aaKnown RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 PAPLNO95428 1278 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ECDO95905 644 aaPredicted RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 EGFRP00533 1210 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 SNRPAP09012 282 aaKnown RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CHN1P15882 459 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ALDH1A3P47895 512 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CACNB3P54284 484 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC12A3P55017 1021 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 DCAF7P61962 342 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 NRG1Q02297 640 aaPredicted RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 FMR1Q06787 632 aaKnown RBP eCLIP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ERV3-1Q14264 604 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 NCF4Q15080 339 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 SPATS1Q496A3 300 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 C5orf22Q49AR2 442 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 DEPDC1Q5TB30 811 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CYP4A22Q5TCH4 519 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 KIF6Q6ZMV9 814 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 RAB11FIP2Q7L804 512 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 KRT73Q86Y46 540 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CMIPQ8IY22 773 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 SLFN12Q8IYM2 578 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ANKRD13CQ8N6S4 541 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CNTD1Q8N815 330 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 C3orf58Q8NDZ4 430 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 LINS1Q8NG48 757 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 OR9A1PQ8NGU1 263 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 EXD1Q8NHP7 514 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 HUS1BQ8NHY5 278 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF671Q8TAW3 534 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 DQX1Q8TE96 717 aaKnown RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 NSMCE3Q96MG7 304 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 TMEM68Q96MH6 324 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 RPRD1AQ96P16 312 aaPredicted RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 NDNQ99608 321 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 COQ7Q99807 217 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 WACQ9BTA9 647 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CINPQ9BW66 212 aaPredicted RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 SHCBP1LQ9BZQ2 653 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ADAM19Q9H013 955 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ZDHHC4Q9NPG8 344 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 COPRSQ9NQ92 184 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 INTS10Q9NVR2 710 aaKnown RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 SIRPGQ9P1W8 387 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 SRP68Q9UHB9 627 aaKnown RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CIDEBQ9UHD4 219 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ERCC6L2Q5T890 1561 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 PTPRGP23470 1445 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SENP3-EIF4A1A0A087X0R7 540 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC35F4A4IF30 521 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L15C9J2P7 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L10C9JJH3 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L13C9JLJ4 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L12C9JPN9 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L11C9JVI0 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L21D6R901 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L18D6R9N7 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L22D6RA61 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L17D6RBQ6 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L19D6RCP7 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L20D6RJB6 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 GUCY1B2O75343 617 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SLITRK5O94991 958 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SSBP05455 408 aaKnown RBP eCLIP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 S100A9P06702 114 aaKnown RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 HSMCR30P0CW71 290 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 CYP2C9P11712 490 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 RABIFP47224 123 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 CCT5P48643 541 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 NLRP11P59045 1033 aaKnown RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP17L24Q0WX57 530 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 CLN3Q13286 438 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SPARCL1Q14515 664 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 NCAPHQ15003 741 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 EFTUD2Q15029 972 aaKnown RBP eCLIP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC39A14Q15043 492 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 AOC3Q16853 763 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF827Q17R98 1081 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SGO1Q5FBB7 561 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 TXNDC11Q6PKC3 985 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SARM1Q6SZW1 724 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF852Q6ZMS4 543 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 USP37Q86T82 979 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 HCAR2Q8TDS4 363 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 DIS3LQ8TF46 1054 aaKnown RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 AK8Q96MA6 479 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC4A9Q96Q91 983 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 MKNK1Q9BUB5 465 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 UCK1Q9HA47 277 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 CNGB3Q9NQW8 809 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 HMG20BQ9P0W2 317 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 FBXO40Q9UH90 709 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SCAF8Q9UPN6 1271 aaKnown RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 PIAS3Q9Y6X2 628 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 IQANK1A0A1B0GTG1 560 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 PMS2P1A4D2B8 440 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms