RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 TMEM176AQ96HP8 235 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 BTNL10A8MVZ5 291 aa30.73■■■□□ 2.51
VEGFA-211ENST00000476772 TMEM253P0C7T8 217 aa30.73■■■□□ 2.51
VEGFA-211ENST00000476772 UNGP13051 313 aaPredicted RBP30.73■■■□□ 2.51
VEGFA-211ENST00000476772 CAPN2P17655 700 aa30.73■■■□□ 2.51
VEGFA-211ENST00000476772 FAM43BQ6ZT52 329 aaPredicted RBP30.73■■■□□ 2.51
VEGFA-211ENST00000476772 PASD1Q8IV76 773 aa30.73■■■□□ 2.51
VEGFA-211ENST00000476772 RABGGTAQ92696 567 aa30.73■■■□□ 2.51
VEGFA-211ENST00000476772 PAAF1Q9BRP4 392 aa30.73■■■□□ 2.51
VEGFA-211ENST00000476772 ELAC1Q9H777 363 aaKnown RBP30.73■■■□□ 2.51
VEGFA-211ENST00000476772 CAPN6Q9Y6Q1 641 aa30.73■■■□□ 2.51
VEGFA-211ENST00000476772 ANKRD62A6NC57 917 aa30.72■■■□□ 2.51
VEGFA-211ENST00000476772 BUB1O43683 1085 aa30.72■■■□□ 2.51
VEGFA-211ENST00000476772 CYP1A1P04798 512 aaPredicted RBP30.72■■■□□ 2.51
VEGFA-211ENST00000476772 CD19P15391 556 aa30.72■■■□□ 2.51
VEGFA-211ENST00000476772 RPL9P32969 192 aaKnown RBP30.72■■■□□ 2.51
VEGFA-211ENST00000476772 ACAD10Q6JQN1 1059 aa30.72■■■□□ 2.51
VEGFA-211ENST00000476772 TRIM72Q6ZMU5 477 aa30.72■■■□□ 2.51
VEGFA-211ENST00000476772 CTNNBL1Q8WYA6 563 aaPredicted RBP30.72■■■□□ 2.51
VEGFA-211ENST00000476772 CYFIP2Q96F07 1278 aa30.72■■■□□ 2.51
VEGFA-211ENST00000476772 THAP2Q9H0W7 228 aa30.72■■■□□ 2.51
VEGFA-211ENST00000476772 PRDM10Q9NQV6 1147 aa30.72■■■□□ 2.51
VEGFA-211ENST00000476772 CASQ1P31415 396 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 TUSC3Q13454 348 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 UPP1Q16831 310 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 C3orf58Q8NDZ4 430 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 NT5C1AQ9BXI3 368 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 L1RE1Q9UN81 338 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 NME7Q9Y5B8 376 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 NAA35Q5VZE5 725 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 LIMS2Q7Z4I7 341 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 RNF10Q8N5U6 811 aaKnown RBP30.71■■■□□ 2.51
VEGFA-211ENST00000476772 APPL2Q8NEU8 664 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 KBTBD7Q8WVZ9 684 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 PCDHB7Q9Y5E2 793 aa30.71■■■□□ 2.51
VEGFA-211ENST00000476772 LOC101059915A0A1B0GWI6 518 aaPredicted RBP30.7■■■□□ 2.5
VEGFA-211ENST00000476772 TACC1O75410 805 aa30.7■■■□□ 2.5
VEGFA-211ENST00000476772 NAP1L1P55209 391 aaKnown RBP30.7■■■□□ 2.5
VEGFA-211ENST00000476772 NOMO3P69849 1222 aa30.7■■■□□ 2.5
VEGFA-211ENST00000476772 NOMO2Q5JPE7 1267 aa30.7■■■□□ 2.5
VEGFA-211ENST00000476772 URGCPQ8TCY9 931 aa30.7■■■□□ 2.5
VEGFA-211ENST00000476772 CPA5Q8WXQ8 436 aa30.7■■■□□ 2.5
VEGFA-211ENST00000476772 ARHGEF26Q96DR7 871 aa30.7■■■□□ 2.5
VEGFA-211ENST00000476772 NOX5Q96PH1 765 aa30.7■■■□□ 2.5
VEGFA-211ENST00000476772 NCANO14594 1321 aa30.7■■■□□ 2.5
VEGFA-211ENST00000476772 HUS1O60921 280 aa30.69■■■□□ 2.5
VEGFA-211ENST00000476772 TOP6BLQ8N6T0 577 aa30.69■■■□□ 2.5
VEGFA-211ENST00000476772 OR6B3Q8NGW1 331 aa30.69■■■□□ 2.5
VEGFA-211ENST00000476772 PCDHGC3Q9UN70 934 aa30.69■■■□□ 2.5
VEGFA-211ENST00000476772 A0A0A6YYK5 440 aaPredicted RBP30.68■■■□□ 2.5
VEGFA-211ENST00000476772 CYB561D2O14569 222 aa30.68■■■□□ 2.5
VEGFA-211ENST00000476772 CENPCQ03188 943 aa30.68■■■□□ 2.5
VEGFA-211ENST00000476772 DDX27Q96GQ7 796 aaKnown RBP30.68■■■□□ 2.5
VEGFA-211ENST00000476772 HEXIM2Q96MH2 286 aaKnown RBP30.68■■■□□ 2.5
VEGFA-211ENST00000476772 PRDM5Q9NQX1 630 aaPredicted RBP30.68■■■□□ 2.5
VEGFA-211ENST00000476772 MED7O43513 233 aa30.68■■■□□ 2.5
VEGFA-211ENST00000476772 ADGRF2Q8IZF7 708 aa30.68■■■□□ 2.5
VEGFA-211ENST00000476772 PDCL2Q8N4E4 241 aa30.68■■■□□ 2.5
VEGFA-211ENST00000476772 TRIM58Q8NG06 486 aa30.68■■■□□ 2.5
VEGFA-211ENST00000476772 VWCEQ96DN2 955 aa30.68■■■□□ 2.5
VEGFA-211ENST00000476772 SENP8Q96LD8 212 aa30.68■■■□□ 2.5
VEGFA-211ENST00000476772 UROC1Q96N76 676 aa30.68■■■□□ 2.5
VEGFA-211ENST00000476772 MICAL3Q7RTP6 2002 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 TRIM43BA6NCK2 446 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 HCRTO43612 131 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 B4GALT3O60512 393 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 VDRP11473 427 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 ITGB8P26012 769 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 TTC3P53804 2025 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 DPH6Q7L8W6 267 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 UNC93AQ86WB7 457 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 RFFLQ8WZ73 363 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 TRIM43Q96BQ3 446 aaPredicted RBP30.67■■■□□ 2.5
VEGFA-211ENST00000476772 TBC1D13Q9NVG8 400 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 LRFN2Q9ULH4 789 aa30.67■■■□□ 2.5
VEGFA-211ENST00000476772 A8MXQ7 604 aa30.66■■■□□ 2.5
VEGFA-211ENST00000476772 EN2P19622 333 aaPredicted RBP30.66■■■□□ 2.5
VEGFA-211ENST00000476772 RFC2P35250 354 aa30.66■■■□□ 2.5
VEGFA-211ENST00000476772 NOP2P46087 812 aaKnown RBP30.66■■■□□ 2.5
VEGFA-211ENST00000476772 NSFP46459 744 aaKnown RBP30.66■■■□□ 2.5
VEGFA-211ENST00000476772 GPC5P78333 572 aa30.66■■■□□ 2.5
VEGFA-211ENST00000476772 SGO2Q562F6 1265 aa30.66■■■□□ 2.5
VEGFA-211ENST00000476772 ZNF280BQ86YH2 543 aa30.66■■■□□ 2.5
VEGFA-211ENST00000476772 ALS2CR12Q96Q35 445 aa30.66■■■□□ 2.5
VEGFA-211ENST00000476772 SNX25Q9H3E2 840 aa30.66■■■□□ 2.5
VEGFA-211ENST00000476772 ATMINO43313 823 aaPredicted RBP30.65■■■□□ 2.5
VEGFA-211ENST00000476772 DDHD2O94830 711 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 LSM8O95777 96 aaKnown RBP30.65■■■□□ 2.5
VEGFA-211ENST00000476772 TIMP1P01033 207 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 GNL1P36915 607 aaPredicted RBP30.65■■■□□ 2.5
VEGFA-211ENST00000476772 AARSP49588 968 aaKnown RBP eCLIP30.65■■■□□ 2.51e-6■■■■□ 20.6
VEGFA-211ENST00000476772 DSC1Q08554 894 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 PAN2Q504Q3 1202 aaKnown RBP30.65■■■□□ 2.5
VEGFA-211ENST00000476772 CNKSR3Q6P9H4 555 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 ACOT1Q86TX2 421 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 OSTM1Q86WC4 334 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 SLC35G2Q8TBE7 412 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 ZNF653Q96CK0 615 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 KANSL3Q9P2N6 904 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 MYH10P35580 1976 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms