RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 EXOC3O60645 756 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 USP1O94782 785 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 VASPP50552 380 aaPredicted RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 STAT2P52630 851 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 DGKZQ13574 1117 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 RASA3Q14644 834 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 MTFR1Q15390 333 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 HP1BP3Q5SSJ5 553 aaPredicted RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 CYFIP1Q7L576 1253 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 TAS1R3Q7RTX0 852 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 PODNQ7Z5L7 613 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 GLIS1Q8NBF1 620 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 C1orf54Q8WWF1 131 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 GATA6Q92908 595 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 AZIN2Q96A70 460 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 BICD1Q96G01 975 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 ZNF577Q9BSK1 485 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 VCXQ9H320 206 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 CTTNBP2NLQ9P2B4 639 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 HSFX1Q9UBD0 423 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 CHMP2BQ9UQN3 213 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 GAS7O60861 476 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 NPR1P16066 1061 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 GHRHRQ02643 423 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 PLEKHG4Q58EX7 1191 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 C15orf39Q6ZRI6 1047 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 ZNF564Q8TBZ8 553 aaPredicted RBP8.85□□□□□ -0.99
VAPB-205ENST00000476395 TRIM11Q96F44 468 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 LRRC37BQ96QE4 947 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 FAM118BQ9BPY3 351 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 MXRA8Q9BRK3 442 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 KIFC3Q9BVG8 833 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 CADM1Q9BY67 442 aaKnown RBP8.85□□□□□ -0.99
VAPB-205ENST00000476395 WNT8AQ9H1J5 351 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 KCNH7Q9NS40 1196 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 LRCH1Q9Y2L9 728 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 COMMD10Q9Y6G5 202 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 GOLGA8IPA6NC78 632 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 GOLGA8JA6NMD2 632 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 K7ENM7 598 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 MAPK13O15264 365 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 P4HA2O15460 535 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 CCNE2O96020 404 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 FDX1P10109 184 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 MAPTP10636 758 aaKnown RBP8.85□□□□□ -0.99
VAPB-205ENST00000476395 AMPD1P23109 780 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 GRIA2P42262 883 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 PTGER2P43116 358 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 POLGP54098 1239 aaPredicted RBP8.85□□□□□ -0.99
VAPB-205ENST00000476395 OVGP1Q12889 678 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 C2CD6Q53TS8 623 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 ACBD5Q5T8D3 534 aaPredicted RBP8.85□□□□□ -0.99
VAPB-205ENST00000476395 DUS1LQ6P1R4 473 aaKnown RBP8.85□□□□□ -0.99
VAPB-205ENST00000476395 C4orf50Q6ZRC1 276 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 TAOK1Q7L7X3 1001 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 PTPRN2Q92932 1015 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 NMD3Q96D46 503 aaKnown RBP8.85□□□□□ -0.99
VAPB-205ENST00000476395 FBXL18Q96ME1 805 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 AGBL1Q96MI9 1066 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 TXLNGQ9NUQ3 528 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 SEPT11Q9NVA2 429 aaKnown RBP8.85□□□□□ -0.99
VAPB-205ENST00000476395 DCTN4Q9UJW0 460 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 PTPRJQ12913 1337 aa8.85□□□□□ -0.99
VAPB-205ENST00000476395 PODXLO00592 558 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 NFIBO00712 420 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 GGPS1O95749 300 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 PLS3P13797 630 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 VHLP40337 213 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 CPA2P48052 419 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 GPC3P51654 580 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 APLP1P51693 650 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 LRRC36Q1X8D7 754 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 ZNF394Q53GI3 561 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 RNF43Q68DV7 783 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 LRRC74BQ6ZQY2 392 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 RNF207Q6ZRF8 634 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 CAPN12Q6ZSI9 719 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 RBM12BQ8IXT5 1001 aaKnown RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 TMEM161BQ8NDZ6 487 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 TAS1R2Q8TE23 839 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 SPATA16Q9BXB7 569 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 HAPLN2Q9GZV7 340 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 TNS1Q9HBL0 1735 aaKnown RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 MAGEA13PA6NCF6 341 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 SPDYE16A6NNV3 312 aaPredicted RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 DDX39AO00148 427 aaKnown RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 TCEA3O75764 348 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 LYNP07948 512 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 TCF4P15884 667 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 KLRC2P26717 231 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 SOX10P56693 466 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 CDR2Q01850 454 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 PTP4A2Q12974 167 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 MTMR2Q13614 643 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 PPP2R5EQ16537 467 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 PARP6Q2NL67 630 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 MTDHQ86UE4 582 aaKnown RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 TRIM42Q8IWZ5 723 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 RIBC1Q8N443 379 aaPredicted RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 POMGNT1Q8WZA1 660 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms