RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 LY75O60449 1722 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 MT-CO1P00395 513 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 GNAI2P04899 355 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 RPLP2P05387 115 aaKnown RBP6.31□□□□□ -1.4
SSR3-206ENST00000476217 UBTFL1P0CB47 393 aaPredicted RBP6.31□□□□□ -1.4
SSR3-206ENST00000476217 GSPT1P15170 499 aaKnown RBP6.31□□□□□ -1.4
SSR3-206ENST00000476217 CRKLP46109 303 aaKnown RBP6.31□□□□□ -1.4
SSR3-206ENST00000476217 ITPK1Q13572 414 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 RRP1BQ14684 758 aaKnown RBP6.31□□□□□ -1.4
SSR3-206ENST00000476217 USP39Q53GS9 565 aaKnown RBP6.31□□□□□ -1.4
SSR3-206ENST00000476217 BEND3Q5T5X7 828 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 RNF207Q6ZRF8 634 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 MIGA2Q7L4E1 593 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 PTF1AQ7RTS3 328 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 ZNF572Q7Z3I7 529 aaPredicted RBP6.31□□□□□ -1.4
SSR3-206ENST00000476217 C1orf210Q8IVY1 113 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 LILRA3Q8N6C8 439 aaPredicted RBP6.31□□□□□ -1.4
SSR3-206ENST00000476217 LINS1Q8NG48 757 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.31□□□□□ -1.4
SSR3-206ENST00000476217 CASKIN2Q8WXE0 1202 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 MYD88Q99836 296 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 ASPSCR1Q9BZE9 553 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 TMEM140Q9NV12 185 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 C9orf78Q9NZ63 289 aaPredicted RBP6.31□□□□□ -1.4
SSR3-206ENST00000476217 CCNL1Q9UK58 526 aaPredicted RBP6.31□□□□□ -1.4
SSR3-206ENST00000476217 ZBTB1Q9Y2K1 713 aa6.31□□□□□ -1.4
SSR3-206ENST00000476217 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 XPOTO43592 962 aaKnown RBP6.3□□□□□ -1.4
SSR3-206ENST00000476217 NDUFS2O75306 463 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 ALDH1L1O75891 902 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 RECQL4O94761 1208 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 IGHDP01880 384 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 INSRRP14616 1297 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 ADSLP30566 484 aaPredicted RBP6.3□□□□□ -1.4
SSR3-206ENST00000476217 RABGGTBP53611 331 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 HDAC1Q13547 482 aaPredicted RBP6.3□□□□□ -1.4
SSR3-206ENST00000476217 ACAP2Q15057 778 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 NOMO1Q15155 1222 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 ATP2B3Q16720 1220 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 PTPN21Q16825 1174 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 ABCB5Q2M3G0 1257 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 PPP4R3AQ6IN85 833 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 ELOA2Q8IYF1 753 aaPredicted RBP6.3□□□□□ -1.4
SSR3-206ENST00000476217 OR52N2Q8NGI0 321 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 ZFP28Q8NHY6 868 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 JADE3Q92613 823 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 HOXB13Q92826 284 aaPredicted RBP6.3□□□□□ -1.4
SSR3-206ENST00000476217 MNTQ99583 582 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 C7orf25Q9BPX7 421 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 DNM3Q9UQ16 869 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 ANKRD36CQ5JPF3 1778 aa6.3□□□□□ -1.4
SSR3-206ENST00000476217 XDHP47989 1333 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 MAP3K15Q6ZN16 1313 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 TBKBP1A7MCY6 615 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 GRM8O00222 908 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 HMMRO75330 724 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 C4BP0C0L5 1744 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 VCAM1P19320 739 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 PTPN7P35236 360 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 IL6STP40189 918 aaPredicted RBP6.29□□□□□ -1.4
SSR3-206ENST00000476217 RECQLP46063 649 aaPredicted RBP6.29□□□□□ -1.4
SSR3-206ENST00000476217 PPP3CAQ08209 521 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 NRN1LQ496H8 165 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 BRDTQ58F21 947 aaPredicted RBP6.29□□□□□ -1.4
SSR3-206ENST00000476217 RRP12Q5JTH9 1297 aaKnown RBP6.29□□□□□ -1.4
SSR3-206ENST00000476217 PRAMEF14Q5SWL7 426 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 Q6ZVL8 140 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 PQLC1Q8N2U9 271 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 MDM1Q8TC05 714 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 HDAC10Q969S8 669 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 CHMP4CQ96CF2 233 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 DCLRE1CQ96SD1 692 aaKnown RBP6.29□□□□□ -1.4
SSR3-206ENST00000476217 SENP6Q9GZR1 1112 aaPredicted RBP6.29□□□□□ -1.4
SSR3-206ENST00000476217 CCDC8Q9H0W5 538 aaPredicted RBP6.29□□□□□ -1.4
SSR3-206ENST00000476217 RGS17Q9UGC6 210 aaPredicted RBP6.29□□□□□ -1.4
SSR3-206ENST00000476217 LRRFIP2Q9Y608 721 aaKnown RBP6.29□□□□□ -1.4
SSR3-206ENST00000476217 TAF1LQ8IZX4 1826 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 SCN7AQ01118 1682 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 COL15A1P39059 1388 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 BCORQ6W2J9 1755 aa6.29□□□□□ -1.4
SSR3-206ENST00000476217 TNS1Q9HBL0 1735 aaKnown RBP6.28□□□□□ -1.4
SSR3-206ENST00000476217 KLRG2A4D1S0 409 aaPredicted RBP6.28□□□□□ -1.4
SSR3-206ENST00000476217 TRIM24O15164 1050 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 STC2O76061 302 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 SNUPNO95149 360 aaKnown RBP6.28□□□□□ -1.4
SSR3-206ENST00000476217 IGKV5-2P06315 115 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 SREBF1P36956 1147 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 ADKP55263 362 aaKnown RBP6.28□□□□□ -1.4
SSR3-206ENST00000476217 GCKRQ14397 625 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 BMT2Q1RMZ1 405 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 HSP90AB3PQ58FF7 597 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 MIIPQ5JXC2 388 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 CEP85Q6P2H3 762 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 GPRIN1Q7Z2K8 1008 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 RPAP2Q8IXW5 612 aaPredicted RBP6.28□□□□□ -1.4
SSR3-206ENST00000476217 RPUSD2Q8IZ73 545 aaKnown RBP6.28□□□□□ -1.4
SSR3-206ENST00000476217 MB21D1Q8N884 522 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 ANKRD44Q8N8A2 993 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 TEKT5Q96M29 485 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms