RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 CERKLQ49MI3 558 aaPredicted RBP18.7■□□□□ 0.58
CCM2-207ENST00000475551 CCDC62Q6P9F0 684 aa18.7■□□□□ 0.58
CCM2-207ENST00000475551 RHOT1Q8IXI2 618 aa18.7■□□□□ 0.58
CCM2-207ENST00000475551 KATNAL2Q8IYT4 538 aa18.7■□□□□ 0.58
CCM2-207ENST00000475551 PDCD7Q8N8D1 485 aaKnown RBP18.7■□□□□ 0.58
CCM2-207ENST00000475551 TRIM11Q96F44 468 aa18.7■□□□□ 0.58
CCM2-207ENST00000475551 ACCSQ96QU6 501 aa18.7■□□□□ 0.58
CCM2-207ENST00000475551 WDR18Q9BV38 432 aa18.7■□□□□ 0.58
CCM2-207ENST00000475551 WRAP73Q9P2S5 460 aaPredicted RBP18.7■□□□□ 0.58
CCM2-207ENST00000475551 COL11A2P13942 1736 aaPredicted RBP18.7■□□□□ 0.58
CCM2-207ENST00000475551 RAD21O60216 631 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 UFL1O94874 794 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 ATP2B4P23634 1241 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 CHRNA5P30532 468 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 GEMIN4P57678 1058 aaKnown RBP18.69■□□□□ 0.58
CCM2-207ENST00000475551 THOC5Q13769 683 aaKnown RBP18.69■□□□□ 0.58
CCM2-207ENST00000475551 USH1GQ495M9 461 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 SLC30A10Q6XR72 485 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 OGFOD1Q8N543 542 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 SMC1BQ8NDV3 1235 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 SPATA16Q9BXB7 569 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 KCNK13Q9HB14 408 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.69■□□□□ 0.582e-6■■■■■ 102.1
CCM2-207ENST00000475551 MYH11P35749 1972 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 NFASCO94856 1347 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 MAGEC1O60732 1142 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 SERPINB3P29508 390 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 GPC3P51654 580 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 DRICH1Q6PGQ1 229 aaPredicted RBP18.69■□□□□ 0.58
CCM2-207ENST00000475551 FAM43BQ6ZT52 329 aaPredicted RBP18.69■□□□□ 0.58
CCM2-207ENST00000475551 EXD1Q8NHP7 514 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 ALKBH8Q96BT7 664 aaKnown RBP18.69■□□□□ 0.58
CCM2-207ENST00000475551 COQ4Q9Y3A0 265 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 WASF2Q9Y6W5 498 aa18.69■□□□□ 0.58
CCM2-207ENST00000475551 WDR91A4D1P6 747 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 ARHGEF35A5YM69 484 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 ATP2A1O14983 1001 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 UBTFL6P0CB48 400 aaPredicted RBP18.68■□□□□ 0.58
CCM2-207ENST00000475551 HOXA13P31271 388 aaPredicted RBP18.68■□□□□ 0.58
CCM2-207ENST00000475551 ZBTB16Q05516 673 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 RASIP1Q5U651 963 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 CENPUQ71F23 418 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 ZBED8Q8IZ13 594 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 RBM17Q96I25 401 aaKnown RBP18.68■□□□□ 0.58
CCM2-207ENST00000475551 TSSK1BQ9BXA7 367 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 IL1RAPL1Q9NZN1 696 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 NYAP2Q9P242 653 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 PPP1R1BQ9UD71 204 aaPredicted RBP18.68■□□□□ 0.58
CCM2-207ENST00000475551 DNAJB4Q9UDY4 337 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 ZNFX1Q9P2E3 1918 aaKnown RBP18.68■□□□□ 0.58
CCM2-207ENST00000475551 NDC80O14777 642 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 LIASO43766 372 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 EEF2P13639 858 aaKnown RBP18.68■□□□□ 0.58
CCM2-207ENST00000475551 PGM1P36871 562 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 SNAP25P60880 206 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 SNRPFP62306 86 aaKnown RBP18.68■□□□□ 0.58
CCM2-207ENST00000475551 KRT39Q6A163 491 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 TCP10LQ8TDR4 215 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 NDNQ99608 321 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 TMEM120AQ9BXJ8 343 aa18.68■□□□□ 0.58
CCM2-207ENST00000475551 UBE2OQ9C0C9 1292 aaKnown RBP18.68■□□□□ 0.58
CCM2-207ENST00000475551 FHDC1Q9C0D6 1143 aaPredicted RBP18.68■□□□□ 0.58
CCM2-207ENST00000475551 HLA-DOAP06340 250 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 PYGLP06737 847 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 NEK3P51956 506 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 DSG1Q02413 1049 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 DLGAP5Q15398 846 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 EAPPQ56P03 285 aaPredicted RBP18.67■□□□□ 0.58
CCM2-207ENST00000475551 HP1BP3Q5SSJ5 553 aaPredicted RBP18.67■□□□□ 0.58
CCM2-207ENST00000475551 ADGRD1Q6QNK2 874 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 GLIS1Q8NBF1 620 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 ZSWIM2Q8NEG5 633 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 OPTNQ96CV9 577 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 MRRFQ96E11 262 aaKnown RBP18.67■□□□□ 0.58
CCM2-207ENST00000475551 PRR11Q96HE9 360 aaPredicted RBP18.67■□□□□ 0.58
CCM2-207ENST00000475551 NT5C1BQ96P26 610 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 HAPLN3Q96S86 360 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 LBHD1Q9BQE6 289 aaPredicted RBP18.67■□□□□ 0.58
CCM2-207ENST00000475551 FBXO6Q9NRD1 293 aaPredicted RBP18.67■□□□□ 0.58
CCM2-207ENST00000475551 TBC1D30Q9Y2I9 924 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 CYP1A1P04798 512 aaPredicted RBP18.67■□□□□ 0.58
CCM2-207ENST00000475551 AMPD1P23109 780 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 CRABP2P29373 138 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 ARSEP51690 589 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 TAS2R40P59535 323 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 MCL1Q07820 350 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 CAPN12Q6ZSI9 719 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 ALLCQ8N6M5 410 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 BANPQ8N9N5 519 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 MZB1Q8WU39 189 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 CENPKQ9BS16 269 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 DHRS4Q9BTZ2 278 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 RANBP17Q9H2T7 1088 aaKnown RBP18.67■□□□□ 0.58
CCM2-207ENST00000475551 ZWILCHQ9H900 591 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 RABGEF1Q9UJ41 708 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 GGA1Q9UJY5 639 aa18.67■□□□□ 0.58
CCM2-207ENST00000475551 H0YIN7 160 aa18.66■□□□□ 0.58
CCM2-207ENST00000475551 CREB3O43889 395 aa18.66■□□□□ 0.58
CCM2-207ENST00000475551 GAS7O60861 476 aa18.66■□□□□ 0.58
CCM2-207ENST00000475551 IL1BP01584 269 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms