RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 TASP1Q9H6P5 420 aa19.55■□□□□ 0.72
RNF220-212ENST00000475378 HPS4Q9NQG7 708 aa19.55■□□□□ 0.72
RNF220-212ENST00000475378 NBEAQ8NFP9 2946 aa19.55■□□□□ 0.72
RNF220-212ENST00000475378 PTPRDP23468 1912 aa19.55■□□□□ 0.72
RNF220-212ENST00000475378 TMEM8BA6NDV4 472 aa19.54■□□□□ 0.72
RNF220-212ENST00000475378 OTOL1A6NHN0 477 aaPredicted RBP19.54■□□□□ 0.72
RNF220-212ENST00000475378 OR6C75A6NL08 312 aa19.54■□□□□ 0.72
RNF220-212ENST00000475378 TRDMT1O14717 391 aaKnown RBP19.54■□□□□ 0.72
RNF220-212ENST00000475378 SOAT2O75908 522 aa19.54■□□□□ 0.72
RNF220-212ENST00000475378 TOP3BO95985 862 aaKnown RBP19.54■□□□□ 0.72
RNF220-212ENST00000475378 LRPAP1P30533 357 aa19.54■□□□□ 0.72
RNF220-212ENST00000475378 ARHGAP15Q53QZ3 475 aa19.54■□□□□ 0.72
RNF220-212ENST00000475378 IL21Q9HBE4 155 aa19.54■□□□□ 0.72
RNF220-212ENST00000475378 LNP1A1A4G5 178 aa19.53■□□□□ 0.72
RNF220-212ENST00000475378 BCLAF3A2AJT9 711 aaKnown RBP19.53■□□□□ 0.72
RNF220-212ENST00000475378 CYP4F8P98187 520 aa19.53■□□□□ 0.72
RNF220-212ENST00000475378 GRSF1Q12849 480 aaKnown RBP eCLIP19.53■□□□□ 0.72
RNF220-212ENST00000475378 MYBPC2Q14324 1141 aa19.53■□□□□ 0.72
RNF220-212ENST00000475378 PTPAQ15257 358 aa19.53■□□□□ 0.72
RNF220-212ENST00000475378 SEZ6Q53EL9 994 aa19.53■□□□□ 0.72
RNF220-212ENST00000475378 SH3PXD2AQ5TCZ1 1133 aa19.53■□□□□ 0.72
RNF220-212ENST00000475378 HHIPQ96QV1 700 aa19.53■□□□□ 0.72
RNF220-212ENST00000475378 TCHPQ9BT92 498 aa19.53■□□□□ 0.72
RNF220-212ENST00000475378 GKN1Q9NS71 199 aa19.53■□□□□ 0.72
RNF220-212ENST00000475378 PI4KAP42356 2102 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 SRRM3A6NNA2 597 aaPredicted RBP19.52■□□□□ 0.72
RNF220-212ENST00000475378 DCLK1O15075 740 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 RNF40O75150 1001 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 LARGE1O95461 756 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 CAVIN2O95810 425 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 EGFP01133 1207 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 OR52Z1P0C646 297 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 HARSP12081 509 aaKnown RBP19.52■□□□□ 0.72
RNF220-212ENST00000475378 CREB5Q02930 508 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 MAPK7Q13164 816 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 DMP1Q13316 513 aaPredicted RBP19.52■□□□□ 0.72
RNF220-212ENST00000475378 RUNX3Q13761 415 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 ZBTB6Q15916 424 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 DAB2IPQ5VWQ8 1189 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 HAUS3Q68CZ6 603 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 ITIH5Q86UX2 942 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 LPIN3Q9BQK8 851 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 SLC46A2Q9BY10 475 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 SMG9Q9H0W8 520 aaKnown RBP19.52■□□□□ 0.72
RNF220-212ENST00000475378 FBRSL1Q9HCM7 1045 aaKnown RBP19.52■□□□□ 0.72
RNF220-212ENST00000475378 THG1LQ9NWX6 298 aaKnown RBP19.52■□□□□ 0.72
RNF220-212ENST00000475378 HSFX1Q9UBD0 423 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 SCN1AP35498 2009 aa19.52■□□□□ 0.72
RNF220-212ENST00000475378 TNRC6BQ9UPQ9 1833 aaKnown RBP19.51■□□□□ 0.71
RNF220-212ENST00000475378 HIP1RO75146 1068 aa19.51■□□□□ 0.71
RNF220-212ENST00000475378 RHOBTB1O94844 696 aa19.51■□□□□ 0.71
RNF220-212ENST00000475378 TYMPP19971 482 aa19.51■□□□□ 0.71
RNF220-212ENST00000475378 CCT6AP40227 531 aaKnown RBP19.51■□□□□ 0.71
RNF220-212ENST00000475378 NOLC1Q14978 699 aaKnown RBP eCLIP19.51■□□□□ 0.71
RNF220-212ENST00000475378 ELF2Q15723 593 aa19.51■□□□□ 0.71
RNF220-212ENST00000475378 USP37Q86T82 979 aa19.51■□□□□ 0.71
RNF220-212ENST00000475378 SCNM1Q9BWG6 230 aa19.51■□□□□ 0.71
RNF220-212ENST00000475378 KMT5AQ9NQR1 393 aa19.51■□□□□ 0.71
RNF220-212ENST00000475378 EBF1Q9UH73 591 aa19.51■□□□□ 0.71
RNF220-212ENST00000475378 RBM19Q9Y4C8 960 aaKnown RBP19.51■□□□□ 0.71
RNF220-212ENST00000475378 TCHHQ07283 1943 aa19.51■□□□□ 0.71
RNF220-212ENST00000475378 TTC26A0AVF1 554 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 TOM1L1O75674 476 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 CXCL8P10145 99 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 CEACAM1P13688 526 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 CSRP1P21291 193 aaKnown RBP19.5■□□□□ 0.71
RNF220-212ENST00000475378 FOSBP53539 338 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 SPAG1Q07617 926 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 KARSQ15046 597 aaKnown RBP19.5■□□□□ 0.71
RNF220-212ENST00000475378 TRIM68Q6AZZ1 485 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 OVOS1Q6IE37 1185 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 NECAB1Q8N987 351 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 NSUN7Q8NE18 718 aaKnown RBP19.5■□□□□ 0.71
RNF220-212ENST00000475378 EBF3Q9H4W6 596 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 PLEKHA5Q9HAU0 1116 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 KIAA1024Q9UPX6 916 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 CACNA1EQ15878 2313 aa19.5■□□□□ 0.71
RNF220-212ENST00000475378 LAMA5O15230 3695 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 CDX4O14627 284 aaPredicted RBP19.49■□□□□ 0.71
RNF220-212ENST00000475378 ATF6P18850 670 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 CYP3A5P20815 502 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 CDC25CP30307 473 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 ORC2Q13416 577 aaPredicted RBP19.49■□□□□ 0.71
RNF220-212ENST00000475378 ZNF174Q15697 407 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 LRSAM1Q6UWE0 723 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 SYT13Q7L8C5 426 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 CMTM8Q8IZV2 173 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 RIN3Q8TB24 985 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 HAPLN2Q9GZV7 340 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 DDX19AQ9NUU7 478 aaKnown RBP19.49■□□□□ 0.71
RNF220-212ENST00000475378 ANKFY1Q9P2R3 1169 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 CCL26Q9Y258 94 aa19.49■□□□□ 0.71
RNF220-212ENST00000475378 FREM2Q5SZK8 3169 aa19.48■□□□□ 0.71
RNF220-212ENST00000475378 PPEF2O14830 753 aa19.48■□□□□ 0.71
RNF220-212ENST00000475378 SLC16A4O15374 487 aa19.48■□□□□ 0.71
RNF220-212ENST00000475378 DRD1P21728 446 aa19.48■□□□□ 0.71
RNF220-212ENST00000475378 FXR2P51116 673 aaKnown RBP eCLIP19.48■□□□□ 0.71
RNF220-212ENST00000475378 GALK1P51570 392 aa19.48■□□□□ 0.71
RNF220-212ENST00000475378 GUCY2FP51841 1108 aa19.48■□□□□ 0.71
RNF220-212ENST00000475378 MCL1Q07820 350 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms