RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 P4HA2O15460 535 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 GLP2RO95838 553 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 EPCAMP16422 314 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 OR1D2P34982 312 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 ASPAP45381 313 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 ROR1Q01973 937 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 KCNC3Q14003 757 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 MAN2A1Q16706 1144 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 TCP11X2Q5H9J9 407 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 SCARA5Q6ZMJ2 495 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 PPFIBP1Q86W92 1011 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 OSTM1Q86WC4 334 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 CCDC150Q8NCX0 1101 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 OR10T2Q8NGX3 314 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 SPATA18Q8TC71 538 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 SLC22A17Q8WUG5 538 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 PABPC5Q96DU9 382 aaKnown RBP16.88■□□□□ 0.29
COL1A1-204ENST00000474644 OXCT2Q9BYC2 517 aaPredicted RBP16.88■□□□□ 0.29
COL1A1-204ENST00000474644 HSD3B7Q9H2F3 369 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 SMYD3Q9H7B4 428 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 NCOR1O75376 2440 aa16.88■□□□□ 0.29
COL1A1-204ENST00000474644 OR6C75A6NL08 312 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 TGM5O43548 720 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 NCK2O43639 380 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 TACC1O75410 805 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 GLUD1P00367 558 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 P4HA1P13674 534 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 ZNF18P17022 549 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 WARSP23381 471 aaKnown RBP16.87■□□□□ 0.29
COL1A1-204ENST00000474644 RAP1GAPP47736 663 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 ADAM15Q13444 863 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 RAB33AQ14088 237 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 IQCB1Q15051 598 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 SKIV2LQ15477 1246 aaKnown RBP16.87■□□□□ 0.29
COL1A1-204ENST00000474644 CTC1Q2NKJ3 1217 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 MIIPQ5JXC2 388 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 PALB2Q86YC2 1186 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL1A1-204ENST00000474644 MRPL45Q9BRJ2 306 aaKnown RBP16.87■□□□□ 0.29
COL1A1-204ENST00000474644 TUBGCP2Q9BSJ2 902 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 NIF3L1Q9GZT8 377 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 SDCBP2Q9H190 292 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 CLDND1Q9NY35 253 aa16.87■□□□□ 0.29
COL1A1-204ENST00000474644 WDR27A2RRH5 827 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 GABRDO14764 452 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 HCRTO43612 131 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 TBX10O75333 385 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 OR4Q2P0C623 313 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 PRKCSHP14314 528 aaPredicted RBP16.86■□□□□ 0.29
COL1A1-204ENST00000474644 CPB1P15086 417 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 LHX1P48742 406 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 ARPP19P56211 112 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 CETN1Q12798 172 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 WDR44Q5JSH3 913 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 LILRA6Q6PI73 481 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 LRSAM1Q6UWE0 723 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 THEM5Q8N1Q8 247 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 CASP10Q92851 521 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 TMEM209Q96SK2 561 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 BCO2Q9BYV7 579 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 NDST4Q9H3R1 872 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 CBX8Q9HC52 389 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 DDX43Q9NXZ2 648 aaKnown RBP16.86■□□□□ 0.29
COL1A1-204ENST00000474644 TAB2Q9NYJ8 693 aa16.86■□□□□ 0.29
COL1A1-204ENST00000474644 BARX2Q9UMQ3 279 aaPredicted RBP16.86■□□□□ 0.29
COL1A1-204ENST00000474644 PLXNA3P51805 1871 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 SMTNL1A8MU46 457 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 CAVIN2O95810 425 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 C1RP00736 705 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 FAM163BP0C2L3 166 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 SRGAP2BP0DMP2 458 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 ACAT1P24752 427 aaKnown RBP16.85■□□□□ 0.29
COL1A1-204ENST00000474644 CDH8P55286 799 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 KRT31Q15323 416 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 VWA3BQ502W6 1294 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 TMEM184AQ6ZMB5 413 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 LMO3Q8TAP4 145 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 INTS2Q9H0H0 1204 aaKnown RBP16.85■□□□□ 0.29
COL1A1-204ENST00000474644 ZCWPW1Q9H0M4 648 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 UBE2ZQ9H832 354 aaPredicted RBP16.85■□□□□ 0.29
COL1A1-204ENST00000474644 MAN1C1Q9NR34 630 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 GCNT4Q9P109 453 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 CLEC1BQ9P126 229 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 FBXW11Q9UKB1 542 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 NME7Q9Y5B8 376 aa16.85■□□□□ 0.29
COL1A1-204ENST00000474644 BECN2A8MW95 431 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 ABLIM3O94929 683 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 SPATA31D3P0C874 917 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 ATP1A3P13637 1013 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 LMO2P25791 158 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 LTBRP36941 435 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 DLX2Q07687 328 aaPredicted RBP16.84■□□□□ 0.29
COL1A1-204ENST00000474644 LRMPQ12912 555 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 EP400NLQ6ZTU2 488 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 SPATA31D4Q6ZUB0 917 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 LUZP1Q86V48 1076 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 FAM200AQ8TCP9 573 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 TATDN2Q93075 761 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 FAXDC2Q96IV6 333 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 ARID3AQ99856 593 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms