RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 C1orf127Q8N9H9 656 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 IQUBQ8NA54 791 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 FOXD4L4Q8WXT5 416 aaPredicted RBP17.04■□□□□ 0.32
CDPF1-205ENST00000474256 DNASE1L2Q92874 299 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 HPS3Q969F9 1004 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 DHX58Q96C10 678 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 ZNF560Q96MR9 790 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 PCIF1Q9H4Z3 704 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 MTF2Q9Y483 593 aaPredicted RBP17.04■□□□□ 0.32
CDPF1-205ENST00000474256 ZFHX2Q9C0A1 2572 aaPredicted RBP17.04■□□□□ 0.32
CDPF1-205ENST00000474256 A0A1W2PRU2 124 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 SHISA7A6NL88 538 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 KIAA0391O15091 583 aaKnown RBP17.03■□□□□ 0.32
CDPF1-205ENST00000474256 LRRN2O75325 713 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 SOAT2O75908 522 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 ITGB3P05106 788 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 HSP90AA1P07900 732 aaKnown RBP17.03■□□□□ 0.32
CDPF1-205ENST00000474256 POLR2BP30876 1174 aaKnown RBP17.03■□□□□ 0.32
CDPF1-205ENST00000474256 HOXD13P35453 343 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 TUFMP49411 452 aaKnown RBP17.03■□□□□ 0.32
CDPF1-205ENST00000474256 SMARCB1Q12824 385 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 GRM2Q14416 872 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 VITQ6UXI7 678 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 ASCL5Q7RTU5 278 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 LRRTM3Q86VH5 581 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 C1orf210Q8IVY1 113 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 GPD1LQ8N335 351 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 ZSCAN18Q8TBC5 510 aaPredicted RBP17.03■□□□□ 0.32
CDPF1-205ENST00000474256 KCNG4Q8TDN1 519 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 C2orf15Q8WU43 125 aaKnown RBP17.03■□□□□ 0.32
CDPF1-205ENST00000474256 CACTINQ8WUQ7 758 aaKnown RBP17.03■□□□□ 0.32
CDPF1-205ENST00000474256 C7orf25Q9BPX7 421 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 TRMT61BQ9BVS5 477 aaKnown RBP17.03■□□□□ 0.32
CDPF1-205ENST00000474256 LTB4R2Q9NPC1 389 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 HEBP1Q9NRV9 189 aa17.03■□□□□ 0.32
CDPF1-205ENST00000474256 PRR23AA6NEV1 266 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 FAM170BA6NMN3 283 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 EIF3DO15371 548 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDPF1-205ENST00000474256 PSMC3P17980 439 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 CD72P21854 359 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 VIPR2P41587 438 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 ASIC1P78348 528 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 FOXD4L6Q3SYB3 417 aaPredicted RBP17.02■□□□□ 0.32
CDPF1-205ENST00000474256 SCARA3Q6AZY7 606 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 ATL3Q6DD88 541 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 FOXD4L3Q6VB84 417 aaPredicted RBP17.02■□□□□ 0.32
CDPF1-205ENST00000474256 TPRG1Q6ZUI0 275 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 GAREM2Q75VX8 874 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 EPM2AIP1Q7L775 607 aaPredicted RBP17.02■□□□□ 0.32
CDPF1-205ENST00000474256 ITIH5Q86UX2 942 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 LRRC52Q8N7C0 313 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 DEPDC1BQ8WUY9 529 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 IRF7Q92985 503 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 NKD2Q969F2 451 aaPredicted RBP17.02■□□□□ 0.32
CDPF1-205ENST00000474256 BRD9Q9H8M2 597 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 MAGEF1Q9HAY2 307 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 PDE11AQ9HCR9 933 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 ZNF334Q9HCZ1 680 aaPredicted RBP17.02■□□□□ 0.32
CDPF1-205ENST00000474256 TRPV5Q9NQA5 729 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 ITGA11Q9UKX5 1188 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 PCDHA7Q9UN72 937 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 AGAP1Q9UPQ3 857 aa17.02■□□□□ 0.32
CDPF1-205ENST00000474256 MYH15Q9Y2K3 1946 aa17.02■□□□□ 0.31
CDPF1-205ENST00000474256 NCANO14594 1321 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 COL4A3Q01955 1670 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 FGF19O95750 216 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 ATF6P18850 670 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 EHHADHQ08426 723 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 PKP1Q13835 747 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 UBXN2BQ14CS0 331 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 MGAT5BQ3V5L5 792 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 ZNF852Q6ZMS4 543 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 MFSD6LQ8IWD5 586 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 DCP1BQ8IZD4 617 aaKnown RBP17.01■□□□□ 0.31
CDPF1-205ENST00000474256 PDCL2Q8N4E4 241 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 CSGALNACT2Q8N6G5 542 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 ZNF507Q8TCN5 953 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 SPPL2BQ8TCT7 592 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 E2F7Q96AV8 911 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 FAM84AQ96KN4 292 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 NELL2Q99435 816 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 SEPT5Q99719 369 aaPredicted RBP17.01■□□□□ 0.31
CDPF1-205ENST00000474256 MKNK1Q9BUB5 465 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 BCO2Q9BYV7 579 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 SLITRK6Q9H5Y7 841 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 GDAP2Q9NXN4 497 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 SIX4Q9UIU6 781 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 ANK1P16157 1881 aa17.01■□□□□ 0.31
CDPF1-205ENST00000474256 ZNF233A6NK53 670 aa17■□□□□ 0.31
CDPF1-205ENST00000474256 HEPACAM2A8MVW5 462 aa17■□□□□ 0.31
CDPF1-205ENST00000474256 TULP1O00294 542 aaPredicted RBP17■□□□□ 0.31
CDPF1-205ENST00000474256 POLR2DO15514 142 aaKnown RBP17■□□□□ 0.31
CDPF1-205ENST00000474256 HAPLN1P10915 354 aaPredicted RBP17■□□□□ 0.31
CDPF1-205ENST00000474256 TARSP26639 723 aaKnown RBP17■□□□□ 0.31
CDPF1-205ENST00000474256 GDI1P31150 447 aa17■□□□□ 0.31
CDPF1-205ENST00000474256 MAGEA9P43362 315 aa17■□□□□ 0.31
CDPF1-205ENST00000474256 CDR1P51861 262 aa17■□□□□ 0.31
CDPF1-205ENST00000474256 RBP5P82980 135 aa17■□□□□ 0.31
CDPF1-205ENST00000474256 FAM26FQ5R3K3 315 aa17■□□□□ 0.31
CDPF1-205ENST00000474256 STXBP5Q5T5C0 1151 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms