RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CBWD5Q5RIA9 395 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 LIN9Q5TKA1 542 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 C11orf57Q6ZUT1 292 aaPredicted RBP13.31□□□□□ -0.28
DDX56-209ENST00000473924 TRIM59Q8IWR1 403 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 KREMEN2Q8NCW0 462 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 ZNF461Q8TAF7 563 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 APOL5Q9BWW9 433 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 NAT10Q9H0A0 1025 aaKnown RBP13.31□□□□□ -0.28
DDX56-209ENST00000473924 XYLT2Q9H1B5 865 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 DNAJC25Q9H1X3 360 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 PLEKHA4Q9H4M7 779 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 THAP9Q9H5L6 903 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 VRTNQ9H8Y1 702 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.31□□□□□ -0.28
DDX56-209ENST00000473924 DDX43Q9NXZ2 648 aaKnown RBP13.31□□□□□ -0.28
DDX56-209ENST00000473924 CD207Q9UJ71 328 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 TSC2P49815 1807 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 PLXNA3P51805 1871 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 SYCE3A1L190 88 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 WDR27A2RRH5 827 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 PRRG1O14668 218 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 N4BP1O75113 896 aaKnown RBP13.3□□□□□ -0.28
DDX56-209ENST00000473924 ASS1P00966 412 aaKnown RBP13.3□□□□□ -0.28
DDX56-209ENST00000473924 OR4Q2P0C623 313 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 FMO5P49326 533 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 MRPS5P82675 430 aaKnown RBP13.3□□□□□ -0.28
DDX56-209ENST00000473924 TSPY1Q01534 308 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 KCNH2Q12809 1159 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 HSP90AA4PQ58FG1 418 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 RARS2Q5T160 578 aaKnown RBP13.3□□□□□ -0.28
DDX56-209ENST00000473924 TPGS2Q68CL5 300 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 SPOPLQ6IQ16 392 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 LILRA6Q6PI73 481 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 SCARA5Q6ZMJ2 495 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 OR6B3Q8NGW1 331 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 SPATA18Q8TC71 538 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 ENOX1Q8TC92 643 aaKnown RBP13.3□□□□□ -0.28
DDX56-209ENST00000473924 HDAC7Q8WUI4 952 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 ATXN2LQ8WWM7 1075 aaKnown RBP13.3□□□□□ -0.28
DDX56-209ENST00000473924 ELMO3Q96BJ8 720 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 MSLNLQ96KJ4 702 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 PI4K2AQ9BTU6 479 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 SNX25Q9H3E2 840 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 SFXN1Q9H9B4 322 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 RAB20Q9NX57 234 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 POLIQ9UNA4 740 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 NFE2L3Q9Y4A8 694 aa13.3□□□□□ -0.28
DDX56-209ENST00000473924 TACC1O75410 805 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 AFPP02771 609 aaKnown RBP13.29□□□□□ -0.28
DDX56-209ENST00000473924 C8AP07357 584 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 ATF2P15336 505 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 WARSP23381 471 aaKnown RBP13.29□□□□□ -0.28
DDX56-209ENST00000473924 PCSK1P29120 753 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 GNL1P36915 607 aaPredicted RBP13.29□□□□□ -0.28
DDX56-209ENST00000473924 NOP14P78316 857 aaKnown RBP13.29□□□□□ -0.28
DDX56-209ENST00000473924 ADCY1Q08828 1119 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 GPR17Q13304 367 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 PUS10Q3MIT2 529 aaKnown RBP13.29□□□□□ -0.28
DDX56-209ENST00000473924 LEXMQ3ZCV2 418 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 ANO6Q4KMQ2 910 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 SLC39A12Q504Y0 691 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 CES5AQ6NT32 575 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 RNF19BQ6ZMZ0 732 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 CCDC149Q6ZUS6 474 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDX56-209ENST00000473924 DCP1BQ8IZD4 617 aaKnown RBP13.29□□□□□ -0.28
DDX56-209ENST00000473924 C12orf76Q8N812 135 aaPredicted RBP13.29□□□□□ -0.28
DDX56-209ENST00000473924 OR10T2Q8NGX3 314 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 SLC7A14Q8TBB6 771 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 PGLYRP2Q96PD5 576 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 TMEM209Q96SK2 561 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 ACBD6Q9BR61 282 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 MRPL45Q9BRJ2 306 aaKnown RBP13.29□□□□□ -0.28
DDX56-209ENST00000473924 SMYD3Q9H7B4 428 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 CYP4F11Q9HBI6 524 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 AFF4Q9UHB7 1163 aaKnown RBP13.29□□□□□ -0.28
DDX56-209ENST00000473924 FBXW11Q9UKB1 542 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 FAM50BQ9Y247 325 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 REV3LO60673 3130 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 EYSQ5T1H1 3165 aa13.29□□□□□ -0.28
DDX56-209ENST00000473924 CCDC195A0A1B0GUA6 201 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 A8MXQ7 604 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 GABRDO14764 452 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 ABLIM3O94929 683 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 PDGFRBP09619 1106 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 FAM163BP0C2L3 166 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 ACAT1P24752 427 aaKnown RBP13.28□□□□□ -0.28
DDX56-209ENST00000473924 RAP1GAPP47736 663 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 CDH8P55286 799 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 MYL5Q02045 173 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 ITIH3Q06033 890 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 SMAD4Q13485 552 aaKnown RBP13.28□□□□□ -0.28
DDX56-209ENST00000473924 PPM1LQ5SGD2 360 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 PTCRAQ6ISU1 281 aaPredicted RBP13.28□□□□□ -0.28
DDX56-209ENST00000473924 SYCE2Q6PIF2 218 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 TMC5Q6UXY8 1006 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 LIMS2Q7Z4I7 341 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 OSTM1Q86WC4 334 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 IRF2BP1Q8IU81 584 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 SMRP1Q8NCR6 262 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms