RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NME7Q9Y5B8 376 aa19.14■□□□□ 0.65
VARS2-206ENST00000473916 TARSL2A2RTX5 802 aaKnown RBP19.13■□□□□ 0.65
VARS2-206ENST00000473916 HMGCRP04035 888 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 VEGFBP49765 207 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 NDST1P52848 882 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 C1QBPQ07021 282 aaKnown RBP19.13■□□□□ 0.65
VARS2-206ENST00000473916 NFX1Q12986 1120 aaKnown RBP19.13■□□□□ 0.65
VARS2-206ENST00000473916 BEND6Q5SZJ8 279 aaPredicted RBP19.13■□□□□ 0.65
VARS2-206ENST00000473916 MAP3K21Q5TCX8 1036 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 C8orf74Q6P047 294 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 SESTD1Q86VW0 696 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 TRIM11Q96F44 468 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 RPS6KC1Q96S38 1066 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 ARFGAP3Q9NP61 516 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 PCDHGC3Q9UN70 934 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 ST3GAL5Q9UNP4 418 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 DERAQ9Y315 318 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 M0QZ92 97 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 O00370 1275 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 HCRTO43612 131 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 RPL7AP62424 266 aaKnown RBP19.13■□□□□ 0.65
VARS2-206ENST00000473916 PTPN11Q06124 597 aaPredicted RBP19.13■□□□□ 0.65
VARS2-206ENST00000473916 PLEKHA7Q6IQ23 1121 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 DPH6Q7L8W6 267 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 TMEM176AQ96HP8 235 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 ZFP42Q96MM3 310 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 MRPL45Q9BRJ2 306 aaKnown RBP19.13■□□□□ 0.65
VARS2-206ENST00000473916 CARD9Q9H257 536 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 AGO3Q9H9G7 860 aaKnown RBP19.13■□□□□ 0.65
VARS2-206ENST00000473916 TRMT13Q9NUP7 481 aaKnown RBP19.13■□□□□ 0.65
VARS2-206ENST00000473916 CACNG4Q9UBN1 327 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 SNX9Q9Y5X1 595 aa19.13■□□□□ 0.65
VARS2-206ENST00000473916 LSM8O95777 96 aaKnown RBP19.12■□□□□ 0.65
VARS2-206ENST00000473916 CYP3A5P20815 502 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 MGAT3Q09327 533 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 LLGL1Q15334 1064 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 PTGISQ16647 500 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 LIN9Q5TKA1 542 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 C9orf57Q5W0N0 161 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 TMEM35BQ8NCS4 154 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 RAET1EQ8TD07 263 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 CALR3Q96L12 384 aaKnown RBP19.12■□□□□ 0.65
VARS2-206ENST00000473916 DDX47Q9H0S4 455 aaKnown RBP19.12■□□□□ 0.65
VARS2-206ENST00000473916 CYP3A43Q9HB55 503 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 DDX20Q9UHI6 824 aaKnown RBP19.12■□□□□ 0.65
VARS2-206ENST00000473916 FRMPD3Q5JV73 1810 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 KRIT1O00522 736 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 RAD51CO43502 376 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 RPS6KA5O75582 802 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 STAU1O95793 577 aaKnown RBP19.12■□□□□ 0.65
VARS2-206ENST00000473916 GLI1P08151 1106 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 PAEPP09466 180 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 PYGMP11217 842 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 IGFBP6P24592 240 aaPredicted RBP19.12■□□□□ 0.65
VARS2-206ENST00000473916 CDH5P33151 784 aaPredicted RBP19.12■□□□□ 0.65
VARS2-206ENST00000473916 CTNNA1P35221 906 aaKnown RBP19.12■□□□□ 0.65
VARS2-206ENST00000473916 THPOP40225 353 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 INCA1Q0VD86 236 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 PTPN20Q4JDL3 420 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 BEST2Q8NFU1 509 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 CFHR5Q9BXR6 569 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 ERVK-5Q9HDB9 667 aa19.12■□□□□ 0.65
VARS2-206ENST00000473916 TCRBV5S1A1TA0A578 114 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 ESYT3A0FGR9 886 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 MIF4GDA9UHW6 222 aaKnown RBP19.11■□□□□ 0.65
VARS2-206ENST00000473916 SPTLC1O15269 473 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 P4HA1P13674 534 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 CST5P28325 142 aaPredicted RBP19.11■□□□□ 0.65
VARS2-206ENST00000473916 AFF1P51825 1210 aaKnown RBP19.11■□□□□ 0.65
VARS2-206ENST00000473916 MYO1EQ12965 1108 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 UBL4BQ8N7F7 174 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 C12orf29Q8N999 325 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 HNRNPLLQ8WVV9 542 aaKnown RBP19.11■□□□□ 0.65
VARS2-206ENST00000473916 VCPIP1Q96JH7 1222 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 HEXIM2Q96MH2 286 aaKnown RBP19.11■□□□□ 0.65
VARS2-206ENST00000473916 GDAP1L1Q96MZ0 367 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 LPIN3Q9BQK8 851 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 FUT8Q9BYC5 575 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 WNT8AQ9H1J5 351 aa19.11■□□□□ 0.65
VARS2-206ENST00000473916 BARX2Q9UMQ3 279 aaPredicted RBP19.11■□□□□ 0.65
VARS2-206ENST00000473916 TCRBV7S2A1N4TA0A589 114 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 PTGESO14684 152 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 MICAL2O94851 1124 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 TRADDQ15628 312 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 XKR4Q5GH76 650 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 REM2Q8IYK8 340 aaPredicted RBP19.1■□□□□ 0.65
VARS2-206ENST00000473916 ZDHHC14Q8IZN3 488 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 LPPQ93052 612 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 FAXDC2Q96IV6 333 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 STIM2Q9P246 746 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 TTC7AQ9ULT0 858 aaPredicted RBP19.1■□□□□ 0.65
VARS2-206ENST00000473916 UBQLN1Q9UMX0 589 aaKnown RBP19.1■□□□□ 0.65
VARS2-206ENST00000473916 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.1■□□□□ 0.65
VARS2-206ENST00000473916 MYO1FO00160 1098 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 TLR3O15455 904 aaKnown RBP19.1■□□□□ 0.65
VARS2-206ENST00000473916 CTNNA2P26232 953 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 OGDHQ02218 1023 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 ZNF252P-AS1Q0IIN9 211 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 RSPH3Q86UC2 560 aa19.1■□□□□ 0.65
VARS2-206ENST00000473916 ERICH1Q86X53 443 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms