RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ITIH3Q06033 890 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 DLX2Q07687 328 aaPredicted RBP16.21■□□□□ 0.19
SNX13-205ENST00000471744 CETN1Q12798 172 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 SMAD4Q13485 552 aaKnown RBP16.21■□□□□ 0.19
SNX13-205ENST00000471744 UVSSAQ2YD98 709 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 LIN9Q5TKA1 542 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 CYP26C1Q6V0L0 522 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 CCDC149Q6ZUS6 474 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 LIMS2Q7Z4I7 341 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 ADGRF2Q8IZF7 708 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 SMRP1Q8NCR6 262 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 KREMEN2Q8NCW0 462 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 FBXL13Q8NEE6 735 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 SLC35C1Q96A29 364 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 FAXDC2Q96IV6 333 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 MMS19Q96T76 1030 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 THAP9Q9H5L6 903 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 MMRN2Q9H8L6 949 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 PRDM6Q9NQX0 595 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 AFF4Q9UHB7 1163 aaKnown RBP16.21■□□□□ 0.19
SNX13-205ENST00000471744 L1RE1Q9UN81 338 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 NCOR1O75376 2440 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 H3BQ06 376 aaPredicted RBP16.2■□□□□ 0.18
SNX13-205ENST00000471744 PMM2O15305 246 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 P4HA2O15460 535 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 ADAM12O43184 909 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 TACC1O75410 805 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 ABLIM3O94929 683 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 ASS1P00966 412 aaKnown RBP16.2■□□□□ 0.18
SNX13-205ENST00000471744 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
SNX13-205ENST00000471744 ELF1P32519 619 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 RBM10P98175 930 aaKnown RBP16.2■□□□□ 0.18
SNX13-205ENST00000471744 TSPY1Q01534 308 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 SOWAHAQ2M3V2 549 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 CES5AQ6NT32 575 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 RSPO2Q6UXX9 243 aaPredicted RBP16.2■□□□□ 0.18
SNX13-205ENST00000471744 TRIM59Q8IWR1 403 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNX13-205ENST00000471744 DCP1BQ8IZD4 617 aaKnown RBP16.2■□□□□ 0.18
SNX13-205ENST00000471744 CMASQ8NFW8 434 aaPredicted RBP16.2■□□□□ 0.18
SNX13-205ENST00000471744 ENOX1Q8TC92 643 aaKnown RBP16.2■□□□□ 0.18
SNX13-205ENST00000471744 ACBD6Q9BR61 282 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 RHOBTB2Q9BYZ6 727 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 NAT10Q9H0A0 1025 aaKnown RBP16.2■□□□□ 0.18
SNX13-205ENST00000471744 ZDHHC7Q9NXF8 308 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 MAGEC2Q9UBF1 373 aaPredicted RBP16.2■□□□□ 0.18
SNX13-205ENST00000471744 COQ4Q9Y3A0 265 aa16.2■□□□□ 0.18
SNX13-205ENST00000471744 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNX13-205ENST00000471744 WDR27A2RRH5 827 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 GABRDO14764 452 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 HNRNPA1P09651 372 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNX13-205ENST00000471744 ATF2P15336 505 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 WARSP23381 471 aaKnown RBP16.19■□□□□ 0.18
SNX13-205ENST00000471744 HOXA9P31269 272 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 ARPP19P56211 112 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 TYRO3Q06418 890 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 GPR17Q13304 367 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 SCARA3Q6AZY7 606 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 SYCE2Q6PIF2 218 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 TAS1R2Q8TE23 839 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 C2orf15Q8WU43 125 aaKnown RBP16.19■□□□□ 0.18
SNX13-205ENST00000471744 CNOT6LQ96LI5 555 aaKnown RBP16.19■□□□□ 0.18
SNX13-205ENST00000471744 MED15Q96RN5 788 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 ADAM7Q9H2U9 754 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 RAB20Q9NX57 234 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 DDX43Q9NXZ2 648 aaKnown RBP16.19■□□□□ 0.18
SNX13-205ENST00000471744 HSFX1Q9UBD0 423 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 NXF1Q9UBU9 619 aaKnown RBP16.19■□□□□ 0.18
SNX13-205ENST00000471744 COL6A3P12111 3177 aa16.19■□□□□ 0.18
SNX13-205ENST00000471744 ZMYND10O75800 440 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 PAPLNO95428 1278 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 FMO5P49326 533 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 NOP14P78316 857 aaKnown RBP16.18■□□□□ 0.18
SNX13-205ENST00000471744 TFF2Q03403 129 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 WDR44Q5JSH3 913 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 TCEAL8Q8IYN2 117 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 OR10T2Q8NGX3 314 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 RIPOR3Q96MK2 946 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 NECTIN4Q96NY8 510 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 ASB2Q96Q27 587 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 ZCWPW1Q9H0M4 648 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 S1PR5Q9H228 398 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 SNX25Q9H3E2 840 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 FAM124BQ9H5Z6 455 aaPredicted RBP16.18■□□□□ 0.18
SNX13-205ENST00000471744 C2orf16Q68DN1 1984 aa16.18■□□□□ 0.18
SNX13-205ENST00000471744 PRRG1O14668 218 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 MBTPS2O43462 519 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 AFPP02771 609 aaKnown RBP16.17■□□□□ 0.18
SNX13-205ENST00000471744 C8AP07357 584 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 POU2F2P09086 479 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 SPATA31D3P0C874 917 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 TRIM21P19474 475 aaKnown RBP16.17■□□□□ 0.18
SNX13-205ENST00000471744 GNL1P36915 607 aaPredicted RBP16.17■□□□□ 0.18
SNX13-205ENST00000471744 MTHFRP42898 656 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 ADCY1Q08828 1119 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 KCNH2Q12809 1159 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 MAPRE1Q15691 268 aaKnown RBP16.17■□□□□ 0.18
SNX13-205ENST00000471744 NFE2Q16621 373 aaPredicted RBP16.17■□□□□ 0.18
SNX13-205ENST00000471744 CBWD6Q4V339 395 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 CBWD3Q5JTY5 395 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms