RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 SESTD1Q86VW0 696 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 TREML1Q86YW5 311 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 RHOT2Q8IXI1 618 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 DHX37Q8IY37 1157 aaKnown RBP6.09□□□□□ -1.43
HDAC8-216ENST00000470998 TMEM161BQ8NDZ6 487 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 AFAP1L1Q8TED9 768 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 SLC7A3Q8WY07 619 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 RFFLQ8WZ73 363 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 BHMTQ93088 406 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 TIFAQ96CG3 184 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 TRIM11Q96F44 468 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 OSBPL9Q96SU4 736 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 SELENOOQ9BVL4 669 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 ANKZF1Q9H8Y5 726 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 TMEM8AQ9HCN3 771 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 SIX2Q9NPC8 291 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 HSPBP1Q9NZL4 362 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 ARHGAP28Q9P2N2 729 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 WRAP73Q9P2S5 460 aaPredicted RBP6.09□□□□□ -1.43
HDAC8-216ENST00000470998 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.09□□□□□ -1.43
HDAC8-216ENST00000470998 ADAMTS1Q9UHI8 967 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 PUF60Q9UHX1 559 aaKnown RBP6.09□□□□□ -1.43
HDAC8-216ENST00000470998 TTC7AQ9ULT0 858 aaPredicted RBP6.09□□□□□ -1.43
HDAC8-216ENST00000470998 CAPN6Q9Y6Q1 641 aa6.09□□□□□ -1.43
HDAC8-216ENST00000470998 MYH7BA7E2Y1 1941 aa6.09□□□□□ -1.44
HDAC8-216ENST00000470998 LOXHD1Q8IVV2 1947 aa6.09□□□□□ -1.44
HDAC8-216ENST00000470998 SMCHD1A6NHR9 2005 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 A0A087X0T9 212 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 A6NNZ2 444 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 MIF4GDA9UHW6 222 aaKnown RBP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 PIK3R2O00459 728 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 CLIC2O15247 247 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 MICAL2O94851 1124 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 ARHGEF15O94989 841 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 CCNE2O96020 404 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 PLEKP08567 350 aaPredicted RBP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 MYL3P08590 195 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 FAM228BP0C875 321 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 MYCLP12524 364 aaPredicted RBP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 GZMAP12544 262 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 ACTN1P12814 892 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 ZSCAN20P17040 1043 aaPredicted RBP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 SLC9A1P19634 815 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 GBP1P32455 592 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 NAMPTP43490 491 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 NPTX2P47972 431 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 CASP4P49662 377 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 CYP2J2P51589 502 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 GPC3P51654 580 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 MFAP3P55082 362 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 NAP1L1P55209 391 aaKnown RBP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 BPIFB4P59827 614 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 ACTR2P61160 394 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 POU5F1Q01860 360 aaKnown RBP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 PRKCEQ02156 737 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 GCNT1Q02742 428 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 STRN3Q13033 797 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 BFSP2Q13515 415 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 RPS6KA1Q15418 735 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 SURF1Q15526 300 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 SNRNP35Q16560 246 aaKnown RBP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 TUBB8Q3ZCM7 444 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 EPC2Q52LR7 807 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 BEND6Q5SZJ8 279 aaPredicted RBP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 FAM102BQ5T8I3 360 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 MEI1Q5TIA1 1274 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 KRT39Q6A163 491 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 CCDC62Q6P9F0 684 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 ABHD15Q6UXT9 468 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 ZNF365Q70YC5 407 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 C16orf59Q7L2K0 433 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 SLFN11Q7Z7L1 901 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 ZNF677Q86XU0 584 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 CREG2Q8IUH2 290 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 LRRN4CLQ8ND94 238 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 SPATA4Q8NEY3 305 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 MAFAQ8NHW3 353 aaPredicted RBP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 PHOSPHO2Q8TCD6 241 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 ACTRT1Q8TDG2 376 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 CTNNBL1Q8WYA6 563 aaPredicted RBP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 FAXDC2Q96IV6 333 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 CEP170P1Q96L14 293 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 FAM161BQ96MY7 647 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 RUNDC3BQ96NL0 473 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 CRACR2AQ9BSW2 395 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 SYT11Q9BT88 431 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 KATNAL1Q9BW62 490 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 PLVAPQ9BX97 442 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 FAM129AQ9BZQ8 928 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 C2orf40Q9H1Z8 148 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 CARD9Q9H257 536 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 TTYH1Q9H313 450 aaPredicted RBP6.08□□□□□ -1.44
HDAC8-216ENST00000470998 ZNF576Q9H609 170 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 IGFLR1Q9H665 355 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 KMT5AQ9NQR1 393 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 CYP26B1Q9NR63 512 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 NRBP2Q9NSY0 501 aa6.08□□□□□ -1.44
HDAC8-216ENST00000470998 ZNF446Q9NWS9 450 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms