RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 ATF7P17544 494 aaPredicted RBP10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 PEX2P28328 305 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 CRABP2P29373 138 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 SSTR1P30872 391 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 RGS2P41220 211 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 HADHBP55084 474 aaKnown RBP10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 LMNB2Q03252 620 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 PDK3Q15120 406 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 NKX1-1Q15270 411 aaPredicted RBP10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 DUS1LQ6P1R4 473 aaKnown RBP10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 SYDE1Q6ZW31 735 aaPredicted RBP10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 KCTD1Q719H9 257 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 PRPF39Q86UA1 669 aaKnown RBP10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 TREML1Q86YW5 311 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 TMPRSS6Q8IU80 811 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 ZNF398Q8TD17 642 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 MORC4Q8TE76 937 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 GJD4Q96KN9 370 aaPredicted RBP10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 SIKE1Q9BRV8 207 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 SHCBP1LQ9BZQ2 653 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 PI4K2BG5E9Z4 385 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 PIK3CDO00329 1044 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 ZBTB39O15060 712 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 VCLP18206 1134 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 ARSEP51690 589 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 CYLC2Q14093 348 aaPredicted RBP10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 B3GNT6Q6ZMB0 384 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 TXNRD3Q86VQ6 643 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 TPH2Q8IWU9 490 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 ADGRF4Q8IZF3 695 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 ZCCHC9Q8N567 271 aaKnown RBP10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 SKA1Q96BD8 255 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 GCNAQ96QF7 691 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 TMEM117Q9H0C3 514 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 RIOX1Q9H6W3 641 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 CYP4F11Q9HBI6 524 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 GMEB1Q9Y692 573 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 ROBO3Q96MS0 1386 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 TNS2Q63HR2 1409 aa10.03□□□□□ -0.8
NHLRC3-203ENST00000470258 SMIM31A0A1B0GVY4 71 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 TISP43B9A030 160 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 USP17L10C9JJH3 530 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 BOLA2-SMG1P6H3BVE0 249 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 ATP2A1O14983 1001 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 ONECUT3O60422 494 aaPredicted RBP10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 LPXNO60711 386 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 PPP1R11O60927 126 aaPredicted RBP10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 BFSP1Q12934 665 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 TFDP1Q14186 410 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 SLC44A4Q53GD3 710 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 SPDYAQ5MJ70 313 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 TRMT1LQ7Z2T5 733 aaKnown RBP10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 NET1Q7Z628 596 aaPredicted RBP10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 FAM178BQ8IXR5 827 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 GDPD5Q8WTR4 605 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 SLCO2A1Q92959 643 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 DGCR14Q96DF8 476 aaKnown RBP10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 HSPBAP1Q96EW2 488 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 FAM163AQ96GL9 167 aaPredicted RBP10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 CCDC28BQ9BUN5 200 aa10.02□□□□□ -0.8
NHLRC3-203ENST00000470258 MYOCOSA0A1B0GUC4 107 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 PDE5AO76074 875 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 CLPTM1O96005 669 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 KRT5P13647 590 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 ACTR3P61158 418 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 MAP3K10Q02779 954 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 ACAP1Q15027 740 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 TMEM259Q4ZIN3 620 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 SH3D19Q5HYK7 790 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 RABGAP1LQ5R372 815 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 TBC1D9BQ66K14 1250 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 LRRC8BQ6P9F7 803 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 C1orf228Q6PIY5 440 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 PTF1AQ7RTS3 328 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 DHDDSQ86SQ9 333 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 EFCAB3Q8N7B9 438 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 NEDD1Q8NHV4 660 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 IQCGQ9H095 443 aaKnown RBP10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 JMJD4Q9H9V9 463 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 AGPAT3Q9NRZ7 376 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 BTBD7Q9P203 1132 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 APPL1Q9UKG1 709 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 GTF3C4Q9UKN8 822 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 C15orf38-AP3S2A0A0A6YYH1 394 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 DKC1O60832 514 aaKnown RBP eCLIP10.02□□□□□ -0.812e-9■□□□□ 11.2
NHLRC3-203ENST00000470258 DNAJC6O75061 913 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 ABHD2P08910 425 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 KRT10P13645 584 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 UQCRBP14927 111 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 GRIK5Q16478 980 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 ERFEQ4G0M1 354 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 ODR4Q5SWX8 454 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 KLHDC10Q6PID8 442 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 ARPINQ7Z6K5 226 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 FBXO33Q7Z6M2 555 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 ZNF554Q86TJ5 538 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 ARID3BQ8IVW6 561 aaPredicted RBP10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 KLHL4Q9C0H6 718 aa10.02□□□□□ -0.81
NHLRC3-203ENST00000470258 KCNK13Q9HB14 408 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms