RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS8-219ENST00000469479 MLST8Q9BVC4 326 aa5.81□□□□□ -1.48
VPS8-219ENST00000469479 INO80BQ9C086 356 aaPredicted RBP5.81□□□□□ -1.48
VPS8-219ENST00000469479 IFT57Q9NWB7 429 aa5.81□□□□□ -1.48
VPS8-219ENST00000469479 DDX20Q9UHI6 824 aaKnown RBP5.81□□□□□ -1.48
VPS8-219ENST00000469479 ATP11BQ9Y2G3 1177 aa5.81□□□□□ -1.48
VPS8-219ENST00000469479 PCDHA8Q9Y5H6 950 aa5.81□□□□□ -1.48
VPS8-219ENST00000469479 SPEF2Q9C093 1822 aa5.81□□□□□ -1.48
VPS8-219ENST00000469479 COL4A3Q01955 1670 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 SNAP23O00161 211 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 ARVCFO00192 962 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 MFAP3LO75121 409 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 ZEB1P37275 1124 aaPredicted RBP5.8□□□□□ -1.48
VPS8-219ENST00000469479 GYG1P46976 350 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 CCNA1P78396 465 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 GUCY1A3Q02108 690 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 FPGSQ05932 587 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 CHAF1AQ13111 956 aaPredicted RBP5.8□□□□□ -1.48
VPS8-219ENST00000469479 RAB30Q15771 203 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 DDR2Q16832 855 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 GAGE13Q4V321 117 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 KCNV1Q6PIU1 500 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 SLC39A5Q6ZMH5 540 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 HIPK4Q8NE63 616 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 HERVK_113Q902F9 699 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 USP6NLQ92738 828 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 RUNDC1Q96C34 613 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 RPL10LQ96L21 214 aaKnown RBP5.8□□□□□ -1.48
VPS8-219ENST00000469479 MTIF3Q9H2K0 278 aaKnown RBP5.8□□□□□ -1.48
VPS8-219ENST00000469479 AS3MTQ9HBK9 375 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 SMURF1Q9HCE7 757 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 TRANK1O15050 2925 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 ATRNL1Q5VV63 1379 aa5.8□□□□□ -1.48
VPS8-219ENST00000469479 LTBP2Q14767 1821 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 UBE2QL1A1L167 161 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 GRID2IPA4D2P6 1211 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 ERC2O15083 957 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 PLIN1O60240 522 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 IPO13O94829 963 aaKnown RBP5.79□□□□□ -1.48
VPS8-219ENST00000469479 MAP4K4O95819 1239 aaPredicted RBP5.79□□□□□ -1.48
VPS8-219ENST00000469479 CLTBP09497 229 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 ZNF853P0CG23 659 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 BPIFB4P59827 614 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 TCP10Q12799 353 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 GNL2Q13823 731 aaKnown RBP5.79□□□□□ -1.48
VPS8-219ENST00000469479 SEC23AQ15436 765 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 FKBP15Q5T1M5 1219 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 YOD1Q5VVQ6 348 aaPredicted RBP5.79□□□□□ -1.48
VPS8-219ENST00000469479 CDC42EP5Q6NZY7 148 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 OLFML1Q6UWY5 402 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 LRRC55Q6ZSA7 311 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 ANKRD53Q8N9V6 530 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 IDI2Q9BXS1 227 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 OSBPL5Q9H0X9 879 aaPredicted RBP5.79□□□□□ -1.48
VPS8-219ENST00000469479 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS8-219ENST00000469479 IL23AQ9NPF7 189 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 KCNH7Q9NS40 1196 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 TMOD4Q9NZQ9 345 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 SAE1Q9UBE0 346 aaPredicted RBP5.79□□□□□ -1.48
VPS8-219ENST00000469479 MSRAQ9UJ68 235 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 COG5Q9UP83 839 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 HS3ST4Q9Y661 456 aa5.79□□□□□ -1.48
VPS8-219ENST00000469479 SLC15A5A6NIM6 579 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 GOLGA6L22H0YM25 854 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 KIAA0355O15063 1070 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 FOXP2O15409 715 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 HOXC6P09630 235 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 IFIT1P09914 478 aaKnown RBP5.78□□□□□ -1.48
VPS8-219ENST00000469479 SRGAP2CP0DJJ0 459 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 CNGA1P29973 690 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 CCND3P30281 292 aaPredicted RBP5.78□□□□□ -1.48
VPS8-219ENST00000469479 HOXA7P31268 230 aaPredicted RBP5.78□□□□□ -1.48
VPS8-219ENST00000469479 TREML2Q5T2D2 321 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 HECTD2Q5U5R9 776 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 LMBR1LQ6UX01 489 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 GPR142Q7Z601 462 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 ZGPATQ8N5A5 531 aaKnown RBP5.78□□□□□ -1.48
VPS8-219ENST00000469479 CELF2-AS1Q8N7Q2 184 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 PPM1EQ8WY54 764 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 ZNF669Q96BR6 464 aaPredicted RBP5.78□□□□□ -1.48
VPS8-219ENST00000469479 EDC3Q96F86 508 aaKnown RBP5.78□□□□□ -1.48
VPS8-219ENST00000469479 SLC28A3Q9HAS3 691 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 SLC5A4Q9NY91 659 aa5.78□□□□□ -1.48
VPS8-219ENST00000469479 RBM8AQ9Y5S9 174 aaKnown RBP5.78□□□□□ -1.48
VPS8-219ENST00000469479 CCDC66A2RUB6 948 aa5.77□□□□□ -1.49
VPS8-219ENST00000469479 C2orf78A6NCI8 922 aa5.77□□□□□ -1.49
VPS8-219ENST00000469479 TRIM43BA6NCK2 446 aa5.77□□□□□ -1.49
VPS8-219ENST00000469479 C19orf81C9J6K1 198 aa5.77□□□□□ -1.49
VPS8-219ENST00000469479 SMIM22K7EJ46 135 aa5.77□□□□□ -1.49
VPS8-219ENST00000469479 KCNK3O14649 394 aa5.77□□□□□ -1.49
VPS8-219ENST00000469479 ZNF37AP17032 561 aaPredicted RBP5.77□□□□□ -1.49
VPS8-219ENST00000469479 RGS3P49796 1198 aa5.77□□□□□ -1.49
VPS8-219ENST00000469479 HMGCS2P54868 508 aa5.77□□□□□ -1.49
VPS8-219ENST00000469479 ADAM8P78325 824 aa5.77□□□□□ -1.49
VPS8-219ENST00000469479 SPP2Q13103 211 aa5.77□□□□□ -1.49
VPS8-219ENST00000469479 PPIGQ13427 754 aaKnown RBP eCLIP5.77□□□□□ -1.493e-8■□□□□ 10.6
VPS8-219ENST00000469479 ACAP1Q15027 740 aa5.77□□□□□ -1.49
VPS8-219ENST00000469479 WDR43Q15061 677 aaKnown RBP eCLIP5.77□□□□□ -1.49
VPS8-219ENST00000469479 PUM3Q15397 648 aaKnown RBP5.77□□□□□ -1.49
VPS8-219ENST00000469479 TRIM60Q495X7 471 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms