RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SEPT7Q16181 437 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 CNGA2Q16280 664 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 TRMT5Q32P41 509 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 SLC45A4Q5BKX6 768 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 KLHDC7AQ5VTJ3 777 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 NXNQ6DKJ4 435 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 FAAH2Q6GMR7 532 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 WDR59Q6PJI9 974 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 DTHD1Q6ZMT9 781 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 C4orf50Q6ZRC1 276 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 RALYLQ86SE5 291 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 C11orf74Q86VG3 221 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 TMEM126BQ8IUX1 230 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 ANKRD35Q8N283 1001 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 CRACR2BQ8N4Y2 399 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 SRBD1Q8N5C6 995 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 C12orf50Q8NA57 414 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 FAM13CQ8NE31 585 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 CATSPER1Q8NEC5 780 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 DDHD1Q8NEL9 900 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 RELTQ969Z4 430 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 EME1Q96AY2 570 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 ALKBH8Q96BT7 664 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 MPP4Q96JB8 637 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 TMEM87BQ96K49 555 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 SCYL1Q96KG9 808 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 INPP4AQ96PE3 977 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 FAM129BQ96TA1 746 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 KRT12Q99456 494 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 SELENOSQ9BQE4 189 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 DBNDD2Q9BQY9 259 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 CCDC77Q9BR77 488 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 HAUS8Q9BT25 410 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 HGH1Q9BTY7 390 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 OSBPL10Q9BXB5 764 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 MRPS26Q9BYN8 205 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 TTYH3Q9C0H2 523 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 DHX36Q9H2U1 1008 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 MOV10Q9HCE1 1003 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 NLRC4Q9NPP4 1024 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 ABCF3Q9NUQ8 709 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 TBC1D23Q9NUY8 699 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 SNTG2Q9NY99 539 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 EHD2Q9NZN4 543 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 LRWD1Q9UFC0 647 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 CNOT8Q9UFF9 292 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 TCEAL9Q9UHQ7 104 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 FBXO2Q9UK22 296 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 FBXL5Q9UKA1 691 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 MTUS1Q9ULD2 1270 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 FAF1Q9UNN5 650 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 SCAF8Q9UPN6 1271 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 MAPK8IP1Q9UQF2 711 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 EFR3BQ9Y2G0 817 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 RABGAP1Q9Y3P9 1069 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 COMMD10Q9Y6G5 202 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 SQORQ9Y6N5 450 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 MYH13Q9UKX3 1938 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 UTYO14607 1347 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 FRMPD4Q14CM0 1322 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 COL15A1P39059 1388 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 NID2Q14112 1375 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 STRCQ7RTU9 1775 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 DISP2A7MBM2 1401 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 C1orf167Q5SNV9 1468 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 SLIT1O75093 1534 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 LTBP4Q8N2S1 1624 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 A0A088AWK7 358 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 A0A0A6YYK5 440 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PNMA6FA0A0J9YX94 578 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 TBKBP1A7MCY6 615 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 TTC34A8MYJ7 566 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 E7EWF7 191 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 F6X3S4 739 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 RASGRF2O14827 1237 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 SLC22A1O15245 554 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 RAD51CO43502 376 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 TNFRSF21O75509 655 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 SERPINB7O75635 380 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 CIB2O75838 187 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PSMG1O95456 288 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 GNA14O95837 355 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 RPLP1P05386 114 aaKnown RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 FAM153BP0C7A2 387 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 RARGP13631 454 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 DRD2P14416 443 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 KCNA2P16389 499 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 MAP4P27816 1152 aaKnown RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 GNALP38405 381 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 GRIK1P39086 918 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 RAP1GDS1P52306 607 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 KIF11P52732 1056 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 CSE1LP55060 971 aaKnown RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 NOP14P78316 857 aaKnown RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 CAV1Q03135 178 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 GRIN1Q05586 938 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 LRRC63Q05C16 580 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PPIDQ08752 370 aaKnown RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 GIT2Q14161 759 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 TBCCQ15814 346 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms