RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 MGAT3Q09327 533 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 TDGQ13569 410 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 SSPNQ14714 243 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 FBXO47Q5MNV8 452 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 PRAMEF13Q5VWM6 474 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 ERICH6BQ5W0A0 696 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 KIAA1841Q6NSI8 718 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 C6orf15Q6UXA7 325 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-207ENST00000467273 MCATQ8IVS2 390 aaKnown RBP6.24□□□□□ -1.41
PTCD3-207ENST00000467273 CNPY4Q8N129 248 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 TAB3Q8N5C8 712 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-207ENST00000467273 FAM13CQ8NE31 585 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 PDZD8Q8NEN9 1154 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 LMBR1Q8WVP7 490 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 SECISBP2LQ93073 1101 aaKnown RBP6.24□□□□□ -1.41
PTCD3-207ENST00000467273 INTS4Q96HW7 963 aaKnown RBP6.24□□□□□ -1.41
PTCD3-207ENST00000467273 TMEM87BQ96K49 555 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 RTKNQ9BST9 563 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 TMPRSS5Q9H3S3 457 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 POMKQ9H5K3 350 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 MLXIPQ9HAP2 919 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 CYP26B1Q9NR63 512 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 PXMP2Q9NR77 195 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 COL20A1Q9P218 1284 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 DUSP12Q9UNI6 340 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 TNNQ9UQP3 1299 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 MRPL11Q9Y3B7 192 aaKnown RBP6.24□□□□□ -1.41
PTCD3-207ENST00000467273 ADAMTS20P59510 1910 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 TEX51A0A1B0GUA7 166 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 PDPK1O15530 556 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 PI15O43692 258 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 RANBP6O60518 1105 aaKnown RBP6.23□□□□□ -1.41
PTCD3-207ENST00000467273 KINO60870 393 aaKnown RBP6.23□□□□□ -1.41
PTCD3-207ENST00000467273 CSPG5O95196 566 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 PCP11498 1178 aaKnown RBP6.23□□□□□ -1.41
PTCD3-207ENST00000467273 SCG2P13521 617 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 LAG3P18627 525 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 UBA1P22314 1058 aaKnown RBP6.23□□□□□ -1.41
PTCD3-207ENST00000467273 TPP2P29144 1249 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-207ENST00000467273 POLR2BP30876 1174 aaKnown RBP6.23□□□□□ -1.41
PTCD3-207ENST00000467273 PPM1AP35813 382 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 HSD17B4P51659 736 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 RBM10P98175 930 aaKnown RBP6.23□□□□□ -1.41
PTCD3-207ENST00000467273 NFKB2Q00653 900 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 NEDD9Q14511 834 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 ZNF528Q3MIS6 628 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 GNPTABQ3T906 1256 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 USH1GQ495M9 461 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 SLC6A19Q695T7 634 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 METTL7BQ6UX53 244 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 STOX1Q6ZVD7 989 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 CDH24Q86UP0 819 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 HID1Q8IV36 788 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 LILRA2Q8N149 483 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 OXR1Q8N573 874 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 SUMF1Q8NBK3 374 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 DNAJC7Q99615 494 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 GPR20Q99678 358 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 DPH2Q9BQC3 489 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-207ENST00000467273 TMEM47Q9BQJ4 181 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 PDCD2LQ9BRP1 358 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 XYLT2Q9H1B5 865 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 SETD4Q9NVD3 440 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 TMEM260Q9NX78 707 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 IGSF9Q9P2J2 1179 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 WNT16Q9UBV4 365 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 PCDHB10Q9UN67 800 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 DENND4AQ7Z401 1863 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 KAT6AQ92794 2004 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 LOXHD1Q8IVV2 1947 aa6.23□□□□□ -1.41
PTCD3-207ENST00000467273 FRMPD2Q68DX3 1309 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-207ENST00000467273 ASPMQ8IZT6 3477 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 FNDC1Q4ZHG4 1894 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 MBLAC1A4D2B0 266 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 OTOL1A6NHN0 477 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 NMT2O60551 498 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 ASGR2P07307 311 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 PI3P19957 117 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 CCND2P30279 289 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 SARSP49591 514 aaKnown RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 ATXN1P54253 815 aaKnown RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 MRPS6P82932 125 aaKnown RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 SP2Q02086 613 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 KRT17Q04695 432 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 EGR3Q06889 387 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 TRAF1Q13077 416 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 NONOQ15233 471 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 CDC37Q16543 378 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 ATAT1Q5SQI0 421 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 ODR4Q5SWX8 454 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 SPOUT1Q5T280 376 aaKnown RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 XRRA1Q6P2D8 792 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 ZNF662Q6ZS27 426 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 OTOP3Q7RTS5 596 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 MRPL41Q8IXM3 137 aaKnown RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 SLFN12Q8IYM2 578 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 THNSL1Q8IYQ7 743 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 TMTC2Q8N394 836 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 LILRB2Q8N423 598 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 COLGALT1Q8NBJ5 622 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms