RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 CYFIP2Q96F07 1278 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 HPDLQ96IR7 371 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 NUP85Q9BW27 656 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 EIF2AQ9BY44 585 aaKnown RBP10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 CARD9Q9H257 536 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 LHX5Q9H2C1 402 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 PDCL3Q9H2J4 239 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 CHST12Q9NRB3 414 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 DPP3Q9NY33 737 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 SNTG2Q9NY99 539 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 CNOT8Q9UFF9 292 aaKnown RBP10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 LCMT1Q9UIC8 334 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 UBQLN1Q9UMX0 589 aaKnown RBP10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 GINS2Q9Y248 185 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 PCDHB3Q9Y5E6 796 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 TRPV2Q9Y5S1 764 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 ALG6Q9Y672 507 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 CCDC151A5D8V7 595 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 M0QZ92 97 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 KCNK3O14649 394 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 MED7O43513 233 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 ATP8B1O43520 1251 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 XPOTO43592 962 aaKnown RBP10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 GFRA3O60609 400 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 CILPO75339 1184 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 CD4P01730 458 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 KRT19P08727 400 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 WEE2P0C1S8 567 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 MMP8P22894 467 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 MCM3P25205 808 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 CTNNA2P26232 953 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 CCND3P30281 292 aaPredicted RBP10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 POLR2BP30876 1174 aaKnown RBP10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 SLC1A1P43005 524 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 PRMT2P55345 433 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 RBM10P98175 930 aaKnown RBP10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 MGAT3Q09327 533 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 INCA1Q0VD86 236 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 MYO1EQ12965 1108 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 PTP4A2Q12974 167 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 KCNA10Q16322 511 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 WDR72Q3MJ13 1102 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 GLE1Q53GS7 698 aaKnown RBP10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 NAA35Q5VZE5 725 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 PLEKHA7Q6IQ23 1121 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 GDF6Q6KF10 455 aaPredicted RBP10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 CCDC70Q6NSX1 233 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 FAM228AQ86W67 206 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 TMEM35BQ8NCS4 154 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 BEST2Q8NFU1 509 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 TMUB1Q9BVT8 246 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 TRIM6Q9C030 488 aaPredicted RBP10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 SENP6Q9GZR1 1112 aaPredicted RBP10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 WNT8AQ9H1J5 351 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 MRPL47Q9HD33 250 aaKnown RBP10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 DDX20Q9UHI6 824 aaKnown RBP10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 TMEM59LQ9UK28 342 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 KIAA1257Q9ULG3 409 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 AGAP1Q9UPQ3 857 aa10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 PIN4Q9Y237 131 aaKnown RBP10.15□□□□□ -0.78
APOBEC1-202ENST00000467171 ZSWIM8A7E2V4 1837 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 DOCK3Q8IZD9 2030 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 CAND2O75155 1236 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 RECQL4O94761 1208 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 CLSTN1O94985 981 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 CALB1P05937 261 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 ASGR1P07306 291 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 FAM163BP0C2L3 166 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 ATF7P17544 494 aaPredicted RBP10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 CD58P19256 250 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 CXCR5P32302 372 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 MAN1A1P33908 653 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 RAD23BP54727 409 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 FAM26DQ5JW98 314 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 RNF180Q86T96 592 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 UBL4BQ8N7F7 174 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 USP38Q8NB14 1042 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 WHAMMQ8TF30 809 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 PPP1R13LQ8WUF5 828 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 CPA5Q8WXQ8 436 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 CD101Q93033 1021 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 ZMAT2Q96NC0 199 aaKnown RBP10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 PSMB7Q99436 277 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 TSEN34Q9BSV6 310 aaKnown RBP10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 TRAIPQ9BWF2 469 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 SDCBP2Q9H190 292 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 GOLPH3Q9H4A6 298 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 ADAM22Q9P0K1 906 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 NXF1Q9UBU9 619 aaKnown RBP10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 BARX2Q9UMQ3 279 aaPredicted RBP10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 POLIQ9UNA4 740 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 PACSIN2Q9UNF0 486 aaPredicted RBP10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 NOC2LQ9Y3T9 749 aaKnown RBP10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 CEP83Q9Y592 693 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 CDY2AQ9Y6F7 541 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 SQORQ9Y6N5 450 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 SCINQ9Y6U3 715 aa10.14□□□□□ -0.79
APOBEC1-202ENST00000467171 GRIN2DO15399 1336 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 SMIM28A0A1B0GU29 152 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms