RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 ELMO3Q96BJ8 720 aa10.48□□□□□ -0.73
RTFDC1-205ENST00000466260 ACSF2Q96CM8 615 aaPredicted RBP10.48□□□□□ -0.73
RTFDC1-205ENST00000466260 EEF2KMTQ96G04 330 aa10.48□□□□□ -0.73
RTFDC1-205ENST00000466260 GRPEL1Q9HAV7 217 aa10.48□□□□□ -0.73
RTFDC1-205ENST00000466260 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.48□□□□□ -0.732e-6■■■■■ 149.1
RTFDC1-205ENST00000466260 RMND1Q9NWS8 449 aa10.48□□□□□ -0.73
RTFDC1-205ENST00000466260 CGNQ9P2M7 1197 aaKnown RBP10.48□□□□□ -0.73
RTFDC1-205ENST00000466260 SIX4Q9UIU6 781 aa10.48□□□□□ -0.73
RTFDC1-205ENST00000466260 HOOK1Q9UJC3 728 aaKnown RBP10.48□□□□□ -0.73
RTFDC1-205ENST00000466260 PCDHA5Q9Y5H7 936 aa10.48□□□□□ -0.73
RTFDC1-205ENST00000466260 OBSL1O75147 1896 aa10.48□□□□□ -0.73
RTFDC1-205ENST00000466260 PTPRDP23468 1912 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 ARHGEF37A1IGU5 675 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 LRRIQ3A6PVS8 624 aaPredicted RBP10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 BIN1O00499 593 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 PDXKO00764 312 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 DCXO43602 365 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 HCRTO43612 131 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 TBC1D4O60343 1298 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 HUS1O60921 280 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 XYLBO75191 536 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 PRPF40AO75400 957 aaKnown RBP10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 SOAT2O75908 522 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 SMC2O95347 1197 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 TYMPP19971 482 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 FSHRP23945 695 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 ACAT1P24752 427 aaKnown RBP10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 PNPLA4P41247 253 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 ZNF445P59923 1031 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 DLG4P78352 724 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 TWF1Q12792 350 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 TRPC3Q13507 836 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 SLC39A12Q504Y0 691 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 TRAPPC11Q7Z392 1133 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 C12orf56Q8IXR9 622 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 THEM5Q8N1Q8 247 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 GUF1Q8N442 669 aaKnown RBP10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 TTC9BQ8N6N2 239 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 LRRC52Q8N7C0 313 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 TRIM44Q96DX7 344 aaPredicted RBP10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 HPDLQ96IR7 371 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 MYADMQ96S97 322 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 MMS19Q96T76 1030 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 SEPT5Q99719 369 aaPredicted RBP10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 SMOC2Q9H3U7 446 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 WDR6Q9NNW5 1121 aaKnown RBP10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 LIMD1Q9UGP4 676 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 DSEQ9UL01 958 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 L1RE1Q9UN81 338 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 FRMD4BQ9Y2L6 1034 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 SLC27A5Q9Y2P5 690 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 INSL5Q9Y5Q6 135 aa10.47□□□□□ -0.73
RTFDC1-205ENST00000466260 MTMR11A4FU01 709 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 TRIM49BA6NDI0 452 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 OR6C75A6NL08 312 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 N4BP1O75113 896 aaKnown RBP10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 ABLIM3O94929 683 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 OAZ2O95190 189 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 CST3P01034 146 aaPredicted RBP10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 CYP11A1P05108 521 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 HNRNPA1P09651 372 aaKnown RBP eCLIP10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 TRIM49P0CI25 452 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 TRIM49CP0CI26 452 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 ATF2P15336 505 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 PRCPP42785 496 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 MYO1EQ12965 1108 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 DUSP4Q13115 394 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 CAMK4Q16566 473 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 CCDC142Q17RM4 750 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 MGAT5BQ3V5L5 792 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 PABPC1LQ4VXU2 614 aaKnown RBP10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 ZNF658Q5TYW1 1059 aaPredicted RBP10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 KLHL10Q6JEL2 608 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 SCARA5Q6ZMJ2 495 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 OTOP3Q7RTS5 596 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 OSTM1Q86WC4 334 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 ADGRF2Q8IZF7 708 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 ELMOD1Q8N336 334 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 PDCL2Q8N4E4 241 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 ATAD1Q8NBU5 361 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 ITFG1Q8TB96 612 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 FAM200AQ8TCP9 573 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 ZNF516Q92618 1163 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 BORCS6Q96GS4 357 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 MFSD14AQ96MC6 490 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 TIGD1Q96MW7 591 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 CORO1BQ9BR76 489 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 CRISPLD1Q9H336 500 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 DDX43Q9NXZ2 648 aaKnown RBP10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 ABI2Q9NYB9 513 aaPredicted RBP10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 DNMT3BQ9UBC3 853 aaKnown RBP10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 AFF4Q9UHB7 1163 aaKnown RBP10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 MAN1B1Q9UKM7 699 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 TRAF3IP3Q9Y228 551 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 YIPF1Q9Y548 306 aa10.46□□□□□ -0.73
RTFDC1-205ENST00000466260 DENND4CQ5VZ89 1909 aa10.46□□□□□ -0.74
RTFDC1-205ENST00000466260 MYO16Q9Y6X6 1858 aa10.45□□□□□ -0.74
RTFDC1-205ENST00000466260 AKAP3O75969 853 aa10.45□□□□□ -0.74
RTFDC1-205ENST00000466260 LETM1O95202 739 aaPredicted RBP10.45□□□□□ -0.74
RTFDC1-205ENST00000466260 VNN2O95498 520 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms