RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SMTNP53814 917 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 CYP4F8P98187 520 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 GUCY1B3Q02153 619 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 SPAG1Q07617 926 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 RUNX3Q13761 415 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 PLK5Q496M5 336 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 TMEM196Q5HYL7 178 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 DAB2IPQ5VWQ8 1189 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 UNQ6494/PRO21346Q6UXR6 183 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 SNX29Q8TEQ0 813 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 EXOC4Q96A65 974 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 NTPCRQ9BSD7 190 aaKnown RBP15.73■□□□□ 0.11
SMC1A-204ENST00000463684 ZMIZ1Q9ULJ6 1067 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 SFI1A8K8P3 1242 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 C1QTNF9BB2RNN3 333 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 TRDMT1O14717 391 aaKnown RBP15.72■□□□□ 0.11
SMC1A-204ENST00000463684 LARGE1O95461 756 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 CAVIN2O95810 425 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 C1QTNF9P0C862 333 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 AARSP49588 968 aaKnown RBP eCLIP15.72■□□□□ 0.114e-11■■□□□ 13.1
SMC1A-204ENST00000463684 PPP2R3AQ06190 1150 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 MCL1Q07820 350 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 COL9A2Q14055 689 aaPredicted RBP15.72■□□□□ 0.11
SMC1A-204ENST00000463684 TTC38Q5R3I4 469 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 FSTL4Q6MZW2 842 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 RINT1Q6NUQ1 792 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 SEPT5Q99719 369 aaPredicted RBP15.72■□□□□ 0.11
SMC1A-204ENST00000463684 EDEM2Q9BV94 578 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 TIPINQ9BVW5 301 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 SLC46A2Q9BY10 475 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 ZMYM5Q9UJ78 669 aa15.72■□□□□ 0.11
SMC1A-204ENST00000463684 CACNA1GO43497 2377 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 TRIP11Q15643 1979 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 TTC26A0AVF1 554 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 C4orf47A7E2U8 309 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 RNF40O75150 1001 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 ODC1P11926 461 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 DRD1P21728 446 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 PAX3P23760 479 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 AVPR1AP37288 418 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 ANAPC15P60006 121 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 CREB5Q02930 508 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 MAPK7Q13164 816 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 GNL2Q13823 731 aaKnown RBP15.71■□□□□ 0.11
SMC1A-204ENST00000463684 KARSQ15046 597 aaKnown RBP15.71■□□□□ 0.11
SMC1A-204ENST00000463684 ZBTB6Q15916 424 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 MGAT5BQ3V5L5 792 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 KRT79Q5XKE5 535 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 TCEAL6Q6IPX3 200 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 CC2D1AQ6P1N0 951 aaPredicted RBP15.71■□□□□ 0.11
SMC1A-204ENST00000463684 ZPBP2Q6X784 338 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 C1orf186Q6ZWK4 172 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 CMTM8Q8IZV2 173 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 TMEM130Q8N3G9 435 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 TTC9BQ8N6N2 239 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 SPIRE2Q8WWL2 714 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 TCEAL3Q969E4 200 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 LPIN3Q9BQK8 851 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 FAM83CQ9BQN1 747 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 RUSC1Q9BVN2 902 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 SMG9Q9H0W8 520 aaKnown RBP15.71■□□□□ 0.11
SMC1A-204ENST00000463684 DUSP15Q9H1R2 295 aaPredicted RBP15.71■□□□□ 0.11
SMC1A-204ENST00000463684 FOXP1Q9H334 677 aaPredicted RBP15.71■□□□□ 0.11
SMC1A-204ENST00000463684 EBF3Q9H4W6 596 aa15.71■□□□□ 0.11
SMC1A-204ENST00000463684 PDCD11Q14690 1871 aaKnown RBP15.7■□□□□ 0.1
SMC1A-204ENST00000463684 EGFP01133 1207 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 BFSP1Q12934 665 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 FOXC1Q12948 553 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 KYAT1Q16773 422 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 FBXO43Q4G163 708 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 SLC39A12Q504Y0 691 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 KDF1Q8NAX2 398 aaPredicted RBP15.7■□□□□ 0.1
SMC1A-204ENST00000463684 TMEM161BQ8NDZ6 487 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 BICD1Q96G01 975 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 C8orf76Q96K31 380 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 SENP8Q96LD8 212 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 HHIPQ96QV1 700 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 TSPAN18Q96SJ8 248 aa15.7■□□□□ 0.1
SMC1A-204ENST00000463684 NOL7Q9UMY1 257 aaKnown RBP15.7■□□□□ 0.1
SMC1A-204ENST00000463684 BCLAF3A2AJT9 711 aaKnown RBP15.69■□□□□ 0.1
SMC1A-204ENST00000463684 LACTBL1A8MY62 500 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 GIPC1O14908 333 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 MAPTP10636 758 aaKnown RBP15.69■□□□□ 0.1
SMC1A-204ENST00000463684 PLS3P13797 630 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 GUCY2CP25092 1073 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 TRAPPC10P48553 1259 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 GALK1P51570 392 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 LILRA4P59901 499 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 RAD51AP2Q09MP3 1159 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 ZNF252P-AS1Q0IIN9 211 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 SH3PXD2AQ5TCZ1 1133 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 TRIM68Q6AZZ1 485 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 C4orf32Q8N8J7 132 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 MAB21L3Q8N8X9 362 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 IGSF22Q8N9C0 903 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 GIPC2Q8TF65 315 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 RPF1Q9H9Y2 349 aaKnown RBP15.69■□□□□ 0.1
SMC1A-204ENST00000463684 IL21Q9HBE4 155 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 HPS4Q9NQG7 708 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 TDP1Q9NUW8 608 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms