RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 TMEM196Q5HYL7 178 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 SH3PXD2AQ5TCZ1 1133 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 GAREM2Q75VX8 874 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 SLFN12Q8IYM2 578 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 CSGALNACT1Q8TDX6 532 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 TNFRSF25Q93038 417 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 COL26A1Q96A83 441 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 ZFYVE19Q96K21 471 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 JAKMIP1Q96N16 626 aaKnown RBP8.47□□□□□ -1.05
SMC3-202ENST00000462899 ZMAT2Q96NC0 199 aaKnown RBP8.47□□□□□ -1.05
SMC3-202ENST00000462899 SCNM1Q9BWG6 230 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 SLKQ9H2G2 1235 aaPredicted RBP8.47□□□□□ -1.05
SMC3-202ENST00000462899 CRISPLD1Q9H336 500 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 PRDM9Q9NQV7 894 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 PCDHGC3Q9UN70 934 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 GDAQ9Y2T3 454 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 YIPF1Q9Y548 306 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 SNX14Q9Y5W7 946 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 PTPRBP23467 1997 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 TCHHQ07283 1943 aa8.46□□□□□ -1.05
SMC3-202ENST00000462899 SCN1AP35498 2009 aa8.46□□□□□ -1.05
SMC3-202ENST00000462899 A0A1W2PRU2 124 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 BCLAF3A2AJT9 711 aaKnown RBP8.46□□□□□ -1.06
SMC3-202ENST00000462899 C4orf47A7E2U8 309 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 PODXLO00592 558 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 WNT7AO00755 349 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 ABLIM1O14639 778 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 PRAMEF12O95522 483 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 SPATA31C1P0DKV0 1188 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 MYL4P12829 197 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 XRCC6P12956 609 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMC3-202ENST00000462899 CEACAM1P13688 526 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 HSPA4P34932 840 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 KPNA1P52294 538 aaPredicted RBP8.46□□□□□ -1.06
SMC3-202ENST00000462899 FGD1P98174 961 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 TNK2Q07912 1038 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 SSRP1Q08945 709 aaKnown RBP8.46□□□□□ -1.06
SMC3-202ENST00000462899 MAPK6Q16659 721 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 ARHGAP29Q52LW3 1261 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 BMP2KLQ5H9B9 411 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 NT5DC1Q5TFE4 455 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 IQCEQ6IPM2 695 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 FSTL4Q6MZW2 842 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 ARID3BQ8IVW6 561 aaPredicted RBP8.46□□□□□ -1.06
SMC3-202ENST00000462899 ZBTB8OSQ8IWT0 167 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 TRIM22Q8IYM9 498 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 CAMKK1Q8N5S9 505 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 CEP120Q8N960 986 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 MCPH1Q8NEM0 835 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 PIGOQ8TEQ8 1089 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 ZCCHC14Q8WYQ9 949 aaKnown RBP8.46□□□□□ -1.06
SMC3-202ENST00000462899 THAP11Q96EK4 314 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 SUSD3Q96L08 255 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 ZNF512Q96ME7 567 aaPredicted RBP8.46□□□□□ -1.06
SMC3-202ENST00000462899 SPSB2Q99619 263 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 ADPGKQ9BRR6 497 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 C2orf40Q9H1Z8 148 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 PTPRHQ9HD43 1115 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 KCNJ14Q9UNX9 436 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 NEUROG3Q9Y4Z2 214 aa8.46□□□□□ -1.06
SMC3-202ENST00000462899 A0A087WWV3 80 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 CCDC194A0A1B0GVG4 234 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 FAM221BA6H8Z2 402 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 OTOL1A6NHN0 477 aaPredicted RBP8.45□□□□□ -1.06
SMC3-202ENST00000462899 H7C4K7 107 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 TRDMT1O14717 391 aaKnown RBP8.45□□□□□ -1.06
SMC3-202ENST00000462899 ADH1BP00325 375 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 CCDC192P0DO97 292 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 KCNE1P15382 129 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 GRM5P41594 1212 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 NAMPTP43490 491 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 ZNF280DQ6N043 979 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 BLOC1S2Q6QNY1 142 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 PIK3AP1Q6ZUJ8 805 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 ELMOD1Q8N336 334 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 TTC8Q8TAM2 541 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 EZH1Q92800 747 aaPredicted RBP8.45□□□□□ -1.06
SMC3-202ENST00000462899 TMEM209Q96SK2 561 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 NAP1L4Q99733 375 aaKnown RBP8.45□□□□□ -1.06
SMC3-202ENST00000462899 FAM83CQ9BQN1 747 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 HPS4Q9NQG7 708 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 POLR3BQ9NW08 1133 aaPredicted RBP8.45□□□□□ -1.06
SMC3-202ENST00000462899 CNTN3Q9P232 1028 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 EBF1Q9UH73 591 aa8.45□□□□□ -1.06
SMC3-202ENST00000462899 MYO18AQ92614 2054 aaKnown RBP8.45□□□□□ -1.06
SMC3-202ENST00000462899 NAV2Q8IVL1 2488 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 M0QZQ0 153 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 OAZ2O95190 189 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 CAVIN2O95810 425 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 PROZP22891 400 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 AARSP49588 968 aaKnown RBP eCLIP8.44□□□□□ -1.06
SMC3-202ENST00000462899 ARPP19P56211 112 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 CTXN3Q4LDR2 81 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 SOWAHCQ53LP3 525 aaPredicted RBP8.44□□□□□ -1.06
SMC3-202ENST00000462899 ATF7IP2Q5U623 682 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 PMS2CLQ68D20 193 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 TAS1R3Q7RTX0 852 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 YAF2Q8IY57 180 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 RIN3Q8TB24 985 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 PSMG2Q969U7 264 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms