RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 CRACR2AQ9BSW2 395 aa19.29■□□□□ 0.68
ATPAF2-202ENST00000462733 GOLGA2P5Q9HBQ8 144 aa19.29■□□□□ 0.68
ATPAF2-202ENST00000462733 DPP3Q9NY33 737 aa19.29■□□□□ 0.68
ATPAF2-202ENST00000462733 HPCAL4Q9UM19 191 aa19.29■□□□□ 0.68
ATPAF2-202ENST00000462733 UBQLN1Q9UMX0 589 aaKnown RBP19.29■□□□□ 0.68
ATPAF2-202ENST00000462733 SLC4A7Q9Y6M7 1214 aa19.29■□□□□ 0.68
ATPAF2-202ENST00000462733 CLSTN1O94985 981 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 SOX4Q06945 474 aaPredicted RBP19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 ZACNQ401N2 412 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 CCDC181Q5TID7 509 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 SCARA3Q6AZY7 606 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 C1orf127Q8N9H9 656 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 SPATA4Q8NEY3 305 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 MTIF3Q9H2K0 278 aaKnown RBP19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 NLRC4Q9NPP4 1024 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 VPS18Q9P253 973 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 GRID2IPA4D2P6 1211 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 INPPL1O15357 1258 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 XPOTO43592 962 aaKnown RBP19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 N4BP1O75113 896 aaKnown RBP19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 DGKIO75912 1065 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 KRT19P08727 400 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 RNASELQ05823 741 aaKnown RBP19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 C2orf54Q08AI8 447 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 GRIK3Q13003 919 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 C15orf39Q6ZRI6 1047 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 AENQ8WTP8 325 aaKnown RBP19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 TSPAN18Q96SJ8 248 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 TLR10Q9BXR5 811 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 UBE2OQ9C0C9 1292 aaKnown RBP19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.28■□□□□ 0.686e-15■■■■■ 372.6
ATPAF2-202ENST00000462733 SLC38A7Q9NVC3 462 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 TBC1D13Q9NVG8 400 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 KANSL3Q9P2N6 904 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 CACNG4Q9UBN1 327 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 PCDHGC5Q9Y5F6 944 aa19.28■□□□□ 0.68
ATPAF2-202ENST00000462733 GTPBP10A4D1E9 387 aaKnown RBP19.27■□□□□ 0.68
ATPAF2-202ENST00000462733 ERICH4A6NGS2 130 aa19.27■□□□□ 0.68
ATPAF2-202ENST00000462733 ITGB3P05106 788 aa19.27■□□□□ 0.68
ATPAF2-202ENST00000462733 TNNT3P45378 269 aaPredicted RBP19.27■□□□□ 0.68
ATPAF2-202ENST00000462733 KLHL30Q0D2K2 578 aa19.27■□□□□ 0.68
ATPAF2-202ENST00000462733 RAPGEF1Q13905 1077 aa19.27■□□□□ 0.68
ATPAF2-202ENST00000462733 SHHQ15465 462 aa19.27■□□□□ 0.68
ATPAF2-202ENST00000462733 KLHDC7AQ5VTJ3 777 aa19.27■□□□□ 0.68
ATPAF2-202ENST00000462733 TAS1R2Q8TE23 839 aa19.27■□□□□ 0.68
ATPAF2-202ENST00000462733 SCN1AP35498 2009 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 CASTOR2A6NHX0 329 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 CES2O00748 559 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 LRRN2O75325 713 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 VNN1O95497 513 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 CST3P01034 146 aaPredicted RBP19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 POLR2BP30876 1174 aaKnown RBP19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 PIK3CAP42336 1068 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 CETN1Q12798 172 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 TRPC3Q13507 836 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 CFAP221Q4G0U5 840 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 ZNF280BQ86YH2 543 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 ELMO3Q96BJ8 720 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 RNPC3Q96LT9 517 aaKnown RBP19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 FAM193BQ96PV7 902 aaPredicted RBP19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 SLC9A7Q96T83 725 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 YME1L1Q96TA2 773 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 ZBED2Q9BTP6 218 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 GCNT4Q9P109 453 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 HCSTQ9UBK5 93 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 DAAM1Q9Y4D1 1078 aa19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 RANBP2P49792 3224 aaKnown RBP19.26■□□□□ 0.67
ATPAF2-202ENST00000462733 DDHD2O94830 711 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 HLA-DRAP01903 254 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 ATP2A2P16615 1042 aaKnown RBP19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 CYP3A5P20815 502 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 NCOA4Q13772 614 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 IFI16Q16666 785 aaKnown RBP19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 GBP6Q6ZN66 633 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 FBXL13Q8NEE6 735 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 SEMA4DQ92854 862 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 GDF15Q99988 308 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 SELENOOQ9BVL4 669 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 MRPL9Q9BYD2 267 aaKnown RBP19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 SIX4Q9UIU6 781 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 ITGA11Q9UKX5 1188 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 AGAP1Q9UPQ3 857 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 FAN1Q9Y2M0 1017 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 P4HA2O15460 535 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 B4GALT3O60512 393 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 GJB5O95377 273 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 PRKCIP41743 596 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 TUSC3Q13454 348 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 EXOC3L4Q17RC7 722 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 EPC2Q52LR7 807 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 DPY19L2P1Q6NXN4 242 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 EMBQ6PCB8 327 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 LRRC43Q8N309 656 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 ZNF689Q96CS4 500 aaPredicted RBP19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 PI4K2AQ9BTU6 479 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 RAB20Q9NX57 234 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 SALL4Q9UJQ4 1053 aa19.25■□□□□ 0.67
ATPAF2-202ENST00000462733 PPEF2O14830 753 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 PMM2O15305 246 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 GFPT2O94808 682 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms