RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 KLHL23Q8NBE8 558 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 NCSTNQ92542 709 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 MAK16Q9BXY0 300 aaKnown RBP16.35■□□□□ 0.21
SSR4-206ENST00000460616 ZWILCHQ9H900 591 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 VAV3Q9UKW4 847 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 SLC4A7Q9Y6M7 1214 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 PLIN4Q96Q06 1357 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 CLRN2A0PK11 232 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 A8MXQ7 604 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 PIK3CDO00329 1044 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 ZBTB39O15060 712 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 CYP1A1P04798 512 aaPredicted RBP16.34■□□□□ 0.21
SSR4-206ENST00000460616 VAMP7P51809 220 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 NEK3P51956 506 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 ODR4Q5SWX8 454 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 CAPN12Q6ZSI9 719 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 SLC9A9Q8IVB4 645 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 P2RX7Q99572 595 aaKnown RBP16.34■□□□□ 0.21
SSR4-206ENST00000460616 TRIM55Q9BYV6 548 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 VPS37BQ9H9H4 285 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 SEL1LQ9UBV2 794 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 ASTN2O75129 1339 aaPredicted RBP16.34■□□□□ 0.21
SSR4-206ENST00000460616 UBE4BO95155 1302 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 PYGBP11216 843 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 RALAP11233 206 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 ARFIP2P53365 341 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 USP4Q13107 963 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 TUBGCP5Q96RT8 1024 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 PCIF1Q9H4Z3 704 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 OCEL1Q9H607 264 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 MYOZ2Q9NPC6 264 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 ANGPTL2Q9UKU9 493 aa16.34■□□□□ 0.21
SSR4-206ENST00000460616 UMODL1Q5DID0 1318 aa16.33■□□□□ 0.21
SSR4-206ENST00000460616 P4HA2O15460 535 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 ADRA1DP25100 572 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 SERPINB3P29508 390 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 PGM1P36871 562 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
SSR4-206ENST00000460616 LIN52Q52LA3 116 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 CCDC62Q6P9F0 684 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 RFX8Q6ZV50 586 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 ZFPM1Q8IX07 1006 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 GPC2Q8N158 579 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 PPM1KQ8N3J5 372 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 CENPKQ9BS16 269 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 CCDC28BQ9BUN5 200 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 ATXN10Q9UBB4 475 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 SIPA1L1O43166 1804 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 F5H6K3 240 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 SLURP2P0DP57 97 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 CYP11B1P15538 503 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 KLRC2P26717 231 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 RTP1P59025 263 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 KLF1Q13351 362 aaPredicted RBP16.33■□□□□ 0.2
SSR4-206ENST00000460616 DLGAP5Q15398 846 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 PABPC1LQ4VXU2 614 aaKnown RBP16.33■□□□□ 0.2
SSR4-206ENST00000460616 ACAD10Q6JQN1 1059 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 ARHGAP24Q8N264 748 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 KCTD17Q8N5Z5 321 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 HSD17B14Q9BPX1 270 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 MRIQ9BWK5 157 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 FBXO6Q9NRD1 293 aaPredicted RBP16.33■□□□□ 0.2
SSR4-206ENST00000460616 G3BP2Q9UN86 482 aaKnown RBP16.33■□□□□ 0.2
SSR4-206ENST00000460616 PHF24Q9UPV7 400 aa16.33■□□□□ 0.2
SSR4-206ENST00000460616 WNT10BO00744 389 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 RAD21O60216 631 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 DNAJC6O75061 913 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 SLITRK3O94933 977 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 AMPD1P23109 780 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 ADSSP30520 456 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 DSG1Q02413 1049 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 TCP10Q12799 353 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 KRT72Q14CN4 511 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 FASTKD3Q14CZ7 662 aaKnown RBP16.32■□□□□ 0.2
SSR4-206ENST00000460616 SYDE2Q5VT97 1194 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 IZUMO2Q6UXV1 221 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.32■□□□□ 0.2
SSR4-206ENST00000460616 TRIM74Q86UV6 250 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 TRIM73Q86UV7 250 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 CYP2W1Q8TAV3 490 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 DDX27Q96GQ7 796 aaKnown RBP16.32■□□□□ 0.2
SSR4-206ENST00000460616 OSBPL8Q9BZF1 889 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 MANSC1Q9H8J5 431 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 PSMC3IPQ9P2W1 217 aaPredicted RBP16.32■□□□□ 0.2
SSR4-206ENST00000460616 SLC24A2Q9UI40 661 aa16.32■□□□□ 0.2
SSR4-206ENST00000460616 MTO1Q9Y2Z2 717 aaKnown RBP16.32■□□□□ 0.2
SSR4-206ENST00000460616 RARBP10826 455 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 BMP3P12645 472 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 RPS12P25398 132 aaKnown RBP16.31■□□□□ 0.2
SSR4-206ENST00000460616 SLC1A1P43005 524 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 ZNF280AP59817 542 aaPredicted RBP16.31■□□□□ 0.2
SSR4-206ENST00000460616 TRPM4Q8TD43 1214 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 PRR11Q96HE9 360 aaPredicted RBP16.31■□□□□ 0.2
SSR4-206ENST00000460616 KREMEN1Q96MU8 473 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 SSU72Q9NP77 194 aaKnown RBP16.31■□□□□ 0.2
SSR4-206ENST00000460616 COMMD3-BMI1R4GMX3 469 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 POLR2AP24928 1970 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms