RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 IFIT2P09913 472 aaKnown RBP5.83□□□□□ -1.48
VBP1-202ENST00000460509 PIM1P11309 404 aaPredicted RBP5.83□□□□□ -1.48
VBP1-202ENST00000460509 EN2P19622 333 aaPredicted RBP5.83□□□□□ -1.48
VBP1-202ENST00000460509 SLC25A3Q00325 362 aa5.83□□□□□ -1.48
VBP1-202ENST00000460509 BRD3Q15059 726 aa5.83□□□□□ -1.48
VBP1-202ENST00000460509 LONRF1Q17RB8 773 aa5.83□□□□□ -1.48
VBP1-202ENST00000460509 SLC44A4Q53GD3 710 aa5.83□□□□□ -1.48
VBP1-202ENST00000460509 FAM160B1Q5W0V3 765 aa5.83□□□□□ -1.48
VBP1-202ENST00000460509 SPRED1Q7Z699 444 aa5.83□□□□□ -1.48
VBP1-202ENST00000460509 SYNE4Q8N205 404 aa5.83□□□□□ -1.48
VBP1-202ENST00000460509 CPEB3Q8NE35 698 aaKnown RBP5.83□□□□□ -1.48
VBP1-202ENST00000460509 SLC25A43Q8WUT9 341 aaPredicted RBP5.83□□□□□ -1.48
VBP1-202ENST00000460509 NAA15Q9BXJ9 866 aaKnown RBP5.83□□□□□ -1.48
VBP1-202ENST00000460509 ALOXE3Q9BYJ1 711 aa5.83□□□□□ -1.48
VBP1-202ENST00000460509 CHST12Q9NRB3 414 aa5.83□□□□□ -1.48
VBP1-202ENST00000460509 SLC52A1Q9NWF4 448 aa5.83□□□□□ -1.48
VBP1-202ENST00000460509 STK32BQ9NY57 414 aa5.83□□□□□ -1.48
VBP1-202ENST00000460509 ANO9A1A5B4 782 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 UNC119BA6NIH7 251 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 CFIP05156 583 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 THP07101 528 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 SLC5A1P13866 664 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 LAG3P18627 525 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 PIK3CBP42338 1070 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 SLC11A2P49281 568 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 CXADRP78310 365 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 POU6F2P78424 691 aaPredicted RBP5.82□□□□□ -1.48
VBP1-202ENST00000460509 FPGSQ05932 587 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 IFIT5Q13325 482 aaKnown RBP5.82□□□□□ -1.48
VBP1-202ENST00000460509 RAB32Q13637 225 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 TIGD2Q4W5G0 525 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 PHKBQ93100 1093 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 TMEM125Q96AQ2 219 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 TNIP3Q96KP6 325 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 SLC46A1Q96NT5 459 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 MED15Q96RN5 788 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 ZNF341Q9BYN7 854 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 NRDE2Q9H7Z3 1164 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 SLC2A4RGQ9NR83 387 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 VSX1Q9NZR4 365 aaPredicted RBP5.82□□□□□ -1.48
VBP1-202ENST00000460509 XPR1Q9UBH6 696 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 AFF4Q9UHB7 1163 aaKnown RBP5.82□□□□□ -1.48
VBP1-202ENST00000460509 RAD54BQ9Y620 910 aa5.82□□□□□ -1.48
VBP1-202ENST00000460509 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 GAGE12BA1L429 117 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 GAGE12HA6NDE8 117 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 TMEM233B4DJY2 109 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 KCNA2P16389 499 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 ARFIP2P53365 341 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 RPS16P62249 146 aaKnown RBP5.81□□□□□ -1.48
VBP1-202ENST00000460509 MC2RQ01718 297 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 CD300EQ496F6 205 aaPredicted RBP5.81□□□□□ -1.48
VBP1-202ENST00000460509 B3GNTL1Q67FW5 361 aaPredicted RBP5.81□□□□□ -1.48
VBP1-202ENST00000460509 LAYNQ6UX15 382 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 LRRC55Q6ZSA7 311 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 CLNKQ7Z7G1 428 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 C11orf96Q7Z7L8 435 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 SESTD1Q86VW0 696 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 LIX1LQ8IVB5 337 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 CCDC33Q8N5R6 958 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 PSD4Q8NDX1 1056 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 ZNF483Q8TF39 744 aaPredicted RBP5.81□□□□□ -1.48
VBP1-202ENST00000460509 RAPGEF4Q8WZA2 1011 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 LRIG1Q96JA1 1093 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 MPHOSPH6Q99547 160 aaKnown RBP5.81□□□□□ -1.48
VBP1-202ENST00000460509 STK31Q9BXU1 1019 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 SMOC2Q9H3U7 446 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 ZNF703Q9H7S9 590 aaPredicted RBP5.81□□□□□ -1.48
VBP1-202ENST00000460509 PNPLA8Q9NP80 782 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 KCNE5Q9UJ90 142 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 PHTF1Q9UMS5 762 aa5.81□□□□□ -1.48
VBP1-202ENST00000460509 F5H697 171 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 RASSF9O75901 435 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 CDKL5O76039 1030 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 NR4A1P22736 598 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 DDX6P26196 483 aaKnown RBP eCLIP5.8□□□□□ -1.48
VBP1-202ENST00000460509 PRIM2P49643 509 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 FOXE3Q13461 319 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 TUBA3CQ13748 450 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 UBE4AQ14139 1066 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 GEN1Q17RS7 908 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 LSM12Q3MHD2 195 aaKnown RBP5.8□□□□□ -1.48
VBP1-202ENST00000460509 LONRF3Q496Y0 759 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 TAF2Q6P1X5 1199 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 TUBA3EQ6PEY2 450 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 KRT78Q8N1N4 520 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 MAML1Q92585 1016 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 ZNF518BQ9C0D4 1074 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 MS4A7Q9GZW8 240 aaPredicted RBP5.8□□□□□ -1.48
VBP1-202ENST00000460509 BTBD1Q9H0C5 482 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 SMURF2Q9HAU4 748 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 GALNT9Q9HCQ5 603 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 ETAA1Q9NY74 926 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 CTTNBP2NLQ9P2B4 639 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 ITGB1BP2Q9UKP3 347 aa5.8□□□□□ -1.48
VBP1-202ENST00000460509 TRGV11A0A075B6L2 103 aa5.79□□□□□ -1.48
VBP1-202ENST00000460509 POM121BA6NF01 834 aa5.79□□□□□ -1.48
VBP1-202ENST00000460509 LPXNO60711 386 aa5.79□□□□□ -1.48
VBP1-202ENST00000460509 PEX14O75381 377 aa5.79□□□□□ -1.48
VBP1-202ENST00000460509 SUN1O94901 812 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms