RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 H2AFVQ71UI9 128 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 OTOP2Q7RTS6 562 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 ZNF571Q7Z3V5 609 aaPredicted RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 CDR2LQ86X02 465 aaPredicted RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 EFCAB13Q8IY85 973 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 RNF10Q8N5U6 811 aaKnown RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 BEST2Q8NFU1 509 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 TRIM58Q8NG06 486 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 OR5B17Q8NGF7 314 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 SNX27Q96L92 541 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 NOX5Q96PH1 765 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 AGPAT1Q99943 283 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 GPR88Q9GZN0 384 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 HIPK3Q9H422 1215 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 CD320Q9NPF0 282 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 SEPT11Q9NVA2 429 aaKnown RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 ADAMTS1Q9UHI8 967 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 NAGPAQ9UK23 515 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 AJAP1Q9UKB5 411 aaPredicted RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 GUCA1BQ9UMX6 200 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 REXO2Q9Y3B8 237 aaKnown RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 TANC1Q9C0D5 1861 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 PTPRJQ12913 1337 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 A0A087X0T9 212 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 ANO9A1A5B4 782 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 LPXNO60711 386 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 STAU1O95793 577 aaKnown RBP9.56□□□□□ -0.88
VPS50-207ENST00000458530 KRT19P08727 400 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 FAM228BP0C875 321 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 ZSCAN20P17040 1043 aaPredicted RBP9.56□□□□□ -0.88
VPS50-207ENST00000458530 FGFR4P22455 802 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 HOXA11P31270 313 aaPredicted RBP9.56□□□□□ -0.88
VPS50-207ENST00000458530 THPOP40225 353 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 ARHGAP25P42331 645 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 PRSS12P56730 875 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 RBP5P82980 135 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 PAK2Q13177 524 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 HIC1Q14526 733 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 SLC10A6Q3KNW5 377 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 ZNF569Q5MCW4 686 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 ALYREFQ86V81 257 aaKnown RBP9.56□□□□□ -0.88
VPS50-207ENST00000458530 FAM228AQ86W67 206 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 CEP120Q8N960 986 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 UBE2Q2Q8WVN8 375 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 CTNNBL1Q8WYA6 563 aaPredicted RBP9.56□□□□□ -0.88
VPS50-207ENST00000458530 TRIM11Q96F44 468 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 ZNF560Q96MR9 790 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 KREMEN1Q96MU8 473 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 NAPGQ99747 312 aaPredicted RBP9.56□□□□□ -0.88
VPS50-207ENST00000458530 PI4K2AQ9BTU6 479 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 VRTNQ9H8Y1 702 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 CYP3A43Q9HB55 503 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 CNTN3Q9P232 1028 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 UBQLN1Q9UMX0 589 aaKnown RBP9.56□□□□□ -0.88
VPS50-207ENST00000458530 PCDHB4Q9Y5E5 795 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 PCDHB2Q9Y5E7 798 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 SLC4A7Q9Y6M7 1214 aa9.56□□□□□ -0.88
VPS50-207ENST00000458530 A0A0A6YYK5 440 aaPredicted RBP9.55□□□□□ -0.88
VPS50-207ENST00000458530 PRR33A8MZF0 331 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 ZNF263O14978 683 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 RECQL4O94761 1208 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 ARHGEF15O94989 841 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 PFKMP08237 780 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 NFICP08651 508 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 CTSHP09668 335 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 GZMAP12544 262 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 ATP2A2P16615 1042 aaKnown RBP9.55□□□□□ -0.88
VPS50-207ENST00000458530 PNPLA4P41247 253 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 NAP1L1P55209 391 aaKnown RBP9.55□□□□□ -0.88
VPS50-207ENST00000458530 WNT7BP56706 349 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 MYL6P60660 151 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 TNNC1P63316 161 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 CDR2Q01850 454 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 MGAT3Q09327 533 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 FAM26DQ5JW98 314 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 LAPTM4BQ86VI4 370 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 GLYCTKQ8IVS8 523 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 LRRC52Q8N7C0 313 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 CAGE1Q8TC20 777 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 EPS8L1Q8TE68 723 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 TMEM40Q8WWA1 233 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 TATDN2Q93075 761 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 HLA-CQ95604 372 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 RPS6KC1Q96S38 1066 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 PDCL3Q9H2J4 239 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 SLC38A7Q9NVC3 462 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 DPP3Q9NY33 737 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 SNTG2Q9NY99 539 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 CEP83Q9Y592 693 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 ZNF318Q5VUA4 2279 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 NCANO14594 1321 aa9.55□□□□□ -0.88
VPS50-207ENST00000458530 MACROD2A1Z1Q3 448 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 ANKRD62A6NC57 917 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 FAM86C2PA6NEL3 165 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 RFXAPO00287 272 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 DDX3XO00571 662 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS50-207ENST00000458530 CYP26A1O43174 497 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 MED7O43513 233 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 RTN2O75298 545 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 ITGB3P05106 788 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms