RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ERP44Q9BS26 406 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 UBXN6Q9BZV1 441 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 XYLT2Q9H1B5 865 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 RBM47A0AV96 593 aaKnown RBP14.48□□□□□ -0.09
CLK3-203ENST00000454830 KRT1P04264 644 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 DMTNQ08495 405 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 AMHR2Q16671 573 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 HAUS1Q96CS2 278 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 HMGXB4Q9UGU5 601 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 SCN4AP35499 1836 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 MANSC4A6NHS7 340 aaPredicted RBP14.48□□□□□ -0.09
CLK3-203ENST00000454830 RALAP11233 206 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 FLT3P36888 993 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 SLC1A1P43005 524 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 TAS2R40P59535 323 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 RBP5P82980 135 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 C1QBPQ07021 282 aaKnown RBP14.48□□□□□ -0.09
CLK3-203ENST00000454830 CALCOCO2Q13137 446 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 MARCH8Q5T0T0 291 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 ALS2CLQ60I27 953 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 APBB1IPQ7Z5R6 666 aaPredicted RBP14.48□□□□□ -0.09
CLK3-203ENST00000454830 SH2D3CQ8N5H7 860 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 C7orf31Q8N865 590 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 TTC7AQ9ULT0 858 aaPredicted RBP14.48□□□□□ -0.09
CLK3-203ENST00000454830 AGPSO00116 658 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 ECEL1O95672 775 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 ATP1A2P50993 1020 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 MYO1EQ12965 1108 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 PHF13Q86YI8 300 aaPredicted RBP14.48□□□□□ -0.09
CLK3-203ENST00000454830 ARL8AQ96BM9 186 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 EIF2AQ9BY44 585 aaKnown RBP14.48□□□□□ -0.09
CLK3-203ENST00000454830 ASB7Q9H672 318 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 ZWILCHQ9H900 591 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 IP6K2Q9UHH9 426 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 COL1A2P08123 1366 aa14.48□□□□□ -0.09
CLK3-203ENST00000454830 TLDC2A0PJX2 215 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 LRRD1A4D1F6 860 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 TREHO43280 583 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 PSMA2P25787 234 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 TNFRSF8P28908 595 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 HPDP32754 393 aaPredicted RBP14.47□□□□□ -0.09
CLK3-203ENST00000454830 NFX1Q12986 1120 aaKnown RBP14.47□□□□□ -0.09
CLK3-203ENST00000454830 RGMBQ6NW40 437 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 LEKR1Q6ZMV7 388 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 ILDR2Q71H61 639 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 EMC1Q8N766 993 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 EMID1Q96A84 441 aaPredicted RBP14.47□□□□□ -0.09
CLK3-203ENST00000454830 TJP2Q9UDY2 1190 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 F8VP50 259 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 MMP8P22894 467 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 RGS2P41220 211 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 PTPN11Q06124 597 aaPredicted RBP14.47□□□□□ -0.09
CLK3-203ENST00000454830 DHX34Q14147 1143 aaKnown RBP14.47□□□□□ -0.09
CLK3-203ENST00000454830 RUFY4Q6ZNE9 571 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 RASAL3Q86YV0 1011 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 TWNKQ96RR1 684 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 ZFYVE28Q9HCC9 887 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 FAM49BQ9NUQ9 324 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 DNAJC17Q9NVM6 304 aaKnown RBP14.47□□□□□ -0.09
CLK3-203ENST00000454830 PASKQ96RG2 1323 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 CTNNA2P26232 953 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 COILP38432 576 aaPredicted RBP14.47□□□□□ -0.09
CLK3-203ENST00000454830 PSEN2P49810 448 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 MCCD1P59942 119 aaPredicted RBP14.47□□□□□ -0.09
CLK3-203ENST00000454830 GNASQ5JWF2 1037 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 CHADLQ6NUI6 762 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 TTC27Q6P3X3 843 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 ZNF410Q86VK4 478 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 CD101Q93033 1021 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 SDCBP2Q9H190 292 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 MTRF1LQ9UGC7 380 aaKnown RBP14.47□□□□□ -0.09
CLK3-203ENST00000454830 CENPFP49454 3210 aa14.47□□□□□ -0.09
CLK3-203ENST00000454830 NRCAMQ92823 1304 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 KRT3P12035 628 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 KRT10P13645 584 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 RGS7P49802 495 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 DYNLT1P63172 113 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 NNTQ13423 1086 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 SMTNL2Q2TAL5 461 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 NOTUMQ6P988 496 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 OR6B3Q8NGW1 331 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 KCNN1Q92952 543 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 NFKBIZQ9BYH8 718 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 NXF3Q9H4D5 531 aaKnown RBP14.46□□□□□ -0.09
CLK3-203ENST00000454830 CHST7Q9NS84 486 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 PCSK1NQ9UHG2 260 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 FAM187AA6NFU0 413 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 DCAF8L1A6NGE4 600 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 CTSHP09668 335 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 HSD17B3P37058 310 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 AARSP49588 968 aaKnown RBP eCLIP14.46□□□□□ -0.09
CLK3-203ENST00000454830 CPT1AP50416 773 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 NDST1P52848 882 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 TWF2Q6IBS0 349 aaKnown RBP14.46□□□□□ -0.09
CLK3-203ENST00000454830 ZDHHC14Q8IZN3 488 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 FBXO25Q8TCJ0 367 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 VCPIP1Q96JH7 1222 aa14.46□□□□□ -0.09
CLK3-203ENST00000454830 A0A1B0GUA9 196 aa14.46□□□□□ -0.1
CLK3-203ENST00000454830 GRAP2O75791 330 aa14.46□□□□□ -0.1
CLK3-203ENST00000454830 OR6B2Q6IFH4 312 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms