RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 LRRC14Q15048 493 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 SGSM1Q2NKQ1 1148 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 EAPPQ56P03 285 aaPredicted RBP17.91■□□□□ 0.46
TOM1-210ENST00000449058 TREML2Q5T2D2 321 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 IER5Q5VY09 327 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 SMYD5Q6GMV2 418 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 DNAJC24Q6P3W2 148 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 SPOCD1Q6ZMY3 1216 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 ZBTB33Q86T24 672 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 TMEM35BQ8NCS4 154 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 SEPT1Q8WYJ6 367 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 MCEEQ96PE7 176 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 GGA3Q9NZ52 723 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 CPSF3Q9UKF6 684 aaKnown RBP17.91■□□□□ 0.46
TOM1-210ENST00000449058 ANK1P16157 1881 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 FOXO6A8MYZ6 492 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 F8VP50 259 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 ZBTB7AO95365 584 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 TGFB3P10600 412 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 TAP1Q03518 808 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 DUOXA2Q1HG44 320 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 WDTC1Q8N5D0 677 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 NIPA2Q8N8Q9 360 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 GLIS1Q8NBF1 620 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 C9orf72Q96LT7 481 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 RBM15Q96T37 977 aaKnown RBP eCLIP17.9■□□□□ 0.46
TOM1-210ENST00000449058 FHDC1Q9C0D6 1143 aaPredicted RBP17.9■□□□□ 0.46
TOM1-210ENST00000449058 PCDHGC3Q9UN70 934 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 NAALADL1Q9UQQ1 740 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 DRG1Q9Y295 367 aaKnown RBP17.9■□□□□ 0.46
TOM1-210ENST00000449058 DNALI1O14645 258 aaPredicted RBP17.9■□□□□ 0.46
TOM1-210ENST00000449058 GSTA1P08263 222 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 BRAFP15056 766 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 MAGEA4P43358 317 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 METTL7BQ6UX53 244 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 FUKQ8N0W3 1084 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 ALLCQ8N6M5 410 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 MGARPQ8TDB4 240 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 DYDC1Q8WWB3 177 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 CKAP2Q8WWK9 683 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 FAM167AQ96KS9 214 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 CCDC77Q9BR77 488 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 TCHPQ9BT92 498 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 SLC12A4Q9UP95 1085 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 ACTL7BQ9Y614 415 aa17.9■□□□□ 0.46
TOM1-210ENST00000449058 MGAMO43451 1857 aa17.89■□□□□ 0.46
TOM1-210ENST00000449058 EIF4BP23588 611 aaKnown RBP17.89■□□□□ 0.45
TOM1-210ENST00000449058 LAMTOR4Q0VGL1 99 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 PIGHQ14442 188 aaPredicted RBP17.89■□□□□ 0.45
TOM1-210ENST00000449058 SURF1Q15526 300 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 CCDC142Q17RM4 750 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 SWT1Q5T5J6 900 aaKnown RBP17.89■□□□□ 0.45
TOM1-210ENST00000449058 KAZNQ674X7 775 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 GPAT2Q6NUI2 795 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 TFAP2BQ92481 460 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 HAUS2Q9NVX0 235 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 SNCAIPQ9Y6H5 919 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 hCG_1818297A0A087WSY0 165 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 TCP11X1B4DZS4 312 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 ATP2C2O75185 946 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 ATF7P17544 494 aaPredicted RBP17.89■□□□□ 0.45
TOM1-210ENST00000449058 TMEM63BQ5T3F8 832 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 TXNRD3NBQ6F5E7 133 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 DCUN1D2Q6PH85 259 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 TRPM8Q7Z2W7 1104 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 RIBC1Q8N443 379 aaPredicted RBP17.89■□□□□ 0.45
TOM1-210ENST00000449058 TCP11Q8WWU5 503 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 KCNK9Q9NPC2 374 aa17.89■□□□□ 0.45
TOM1-210ENST00000449058 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.89■□□□□ 0.45
TOM1-210ENST00000449058 POLR2AP24928 1970 aaKnown RBP17.88■□□□□ 0.45
TOM1-210ENST00000449058 GAS2O43903 313 aaKnown RBP17.88■□□□□ 0.45
TOM1-210ENST00000449058 USP2O75604 605 aaPredicted RBP17.88■□□□□ 0.45
TOM1-210ENST00000449058 PRKCBP05771 671 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 HOXC6P09630 235 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 MXD4Q14582 209 aaPredicted RBP17.88■□□□□ 0.45
TOM1-210ENST00000449058 OASLQ15646 514 aaKnown RBP17.88■□□□□ 0.45
TOM1-210ENST00000449058 ANKRD42Q8N9B4 389 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 NKD2Q969F2 451 aaPredicted RBP17.88■□□□□ 0.45
TOM1-210ENST00000449058 XYLT2Q9H1B5 865 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 FGFR1OP2Q9NVK5 253 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 DDX56Q9NY93 547 aaKnown RBP17.88■□□□□ 0.45
TOM1-210ENST00000449058 ZNF148Q9UQR1 794 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 PAPPA2Q9BXP8 1791 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 IGKV6-21A0A0C4DH24 114 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 ZBTB42B2RXF5 422 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 PROZP22891 400 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 CDKN2BP42772 138 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 ASPAP45381 313 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 VCPP55072 806 aaKnown RBP17.88■□□□□ 0.45
TOM1-210ENST00000449058 MAPK6Q16659 721 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 ZNF394Q53GI3 561 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 TFDP3Q5H9I0 405 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 CYB5D1Q6P9G0 228 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 ZBTB8OSQ8IWT0 167 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 MAML1Q92585 1016 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 SGSM3Q96HU1 749 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 GPRC5DQ9NZD1 345 aa17.88■□□□□ 0.45
TOM1-210ENST00000449058 USP15Q9Y4E8 981 aaPredicted RBP17.88■□□□□ 0.45
TOM1-210ENST00000449058 GH1P01241 217 aa17.87■□□□□ 0.45
TOM1-210ENST00000449058 WEE2P0C1S8 567 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms