RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	CDH16	O75309	829 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	RNF8	O76064	485 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	ZCCHC18	P0CG32	403 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	ITIH2	P19823	946 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	GNA15	P30679	374 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	GMPR	P36959	345 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	LIG4	P49917	911 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	GDF10	P55107	478 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	RPS6	P62753	249 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	ZNF268	Q14587	947 aa	Predicted RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	TAF5	Q15542	800 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	PPP2R5E	Q16537	467 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	CDO1	Q16878	200 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	EIF1AD	Q8N9N8	165 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	SHKBP1	Q8TBC3	707 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	HSPH1	Q92598	858 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	SERPINB12	Q96P63	405 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	RPS6KC1	Q96S38	1066 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	RMDN3	Q96TC7	470 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	TMOD2	Q9NZR1	351 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	ZNF831	Q5JPB2	1677 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	RFC5	P40937	340 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	KDSR	Q06136	332 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	PPP2R5C	Q13362	524 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	CLEC16A	Q2KHT3	1053 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	TKFC	Q3LXA3	575 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	MSS51	Q4VC12	460 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	KHDC1	Q4VXA5	237 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	PLEKHG4	Q58EX7	1191 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	WDR44	Q5JSH3	913 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	RNF220	Q5VTB9	566 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	SLC39A4	Q6P5W5	647 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	HHIPL2	Q6UWX4	724 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	OTOA	Q7RTW8	1153 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	OR5B17	Q8NGF7	314 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	TEKT4	Q8WW24	435 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	CFAP36	Q96G28	342 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	NAF1	Q96HR8	494 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	GORASP1	Q9BQQ3	440 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	TARS2	Q9BW92	718 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	PLVAP	Q9BX97	442 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	DIS3	Q9Y2L1	958 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	MRPL11	Q9Y3B7	192 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	CFAP73	A6NFT4	308 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	FSCN2	O14926	492 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	CD48	P09326	243 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	MARK3	P27448	753 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	BSPRY	Q5W0U4	402 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	NLRP9	Q7RTR0	991 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	PTPRN2	Q92932	1015 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	DDX27	Q96GQ7	796 aa	Known RBP	13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	ZDHHC15	Q96MV8	337 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	CALN1	Q9BXU9	219 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	TMEM206	Q9H813	350 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	HEY2	Q9UBP5	337 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	CREB3	O43889	395 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	CAPN15	O75808	1086 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	UNC5C	O95185	931 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	CYP1A2	P05177	515 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	KRT19	P08727	400 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	YWHAG	P61981	247 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	RAB6C	Q53S08	254 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	RBM12B	Q8IXT5	1001 aa	Known RBP	13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	VPS52	Q8N1B4	723 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	ANKRD35	Q8N283	1001 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	FAM111A	Q96PZ2	611 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	RAB6C	Q9H0N0	254 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	LRRC19	Q9H756	370 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	SLC5A4	Q9NY91	659 aa		13.21	□□□□□ -0.29
DDR1-238	ENST00000446312	ARFGEF1	Q9Y6D6	1849 aa		13.21	□□□□□ -0.3
DDR1-238	ENST00000446312	ASTN2	O75129	1339 aa	Predicted RBP	13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	TTLL13P	A6NNM8	815 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	HSPA6	P17066	643 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	CETN2	P41208	172 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	RAP1GAP	P47736	663 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	DRG2	P55039	364 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	BMPR2	Q13873	1038 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	SPARCL1	Q14515	664 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	KPNB1	Q14974	876 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	RCN1	Q15293	331 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	MTFR1	Q15390	333 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	DACT2	Q5SW24	774 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	ARHGEF16	Q5VV41	709 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	TMEM154	Q6P9G4	183 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	C3orf62	Q6ZUJ4	267 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	ANO5	Q75V66	913 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	CCDC125	Q86Z20	511 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	TCP10L	Q8TDR4	215 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	USP6NL	Q92738	828 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	TTC1	Q99614	292 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	ARL8B	Q9NVJ2	186 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	GRIN3B	O60391	1043 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	ATP4A	P20648	1035 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	CCND1	P24385	295 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	SERPINB3	P29508	390 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	ATXN3	P54252	364 aa	Predicted RBP	13.2	□□□□□ -0.3

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