RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ZFXP17010 805 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 SLC1A1P43005 524 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 DNAJC21Q5F1R6 531 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 CFAP157Q5JU67 520 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 ZNF449Q6P9G9 518 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 GDAP1Q8TB36 358 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 HELQQ8TDG4 1101 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 NIFKQ9BYG3 293 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 UBR2Q8IWV8 1755 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 CTNNB1P35222 781 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 PTPN11Q06124 597 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 KCNA1Q09470 495 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 HYIQ5T013 277 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 C4orf32Q8N8J7 132 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 TMEM176AQ96HP8 235 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 FAM105AQ9NUU6 356 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 TISP43B9A030 160 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 TLL1O43897 1013 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 SARSP49591 514 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 PPIGQ13427 754 aaKnown RBP eCLIP14.86□□□□□ -0.031e-6■■■□□ 15.5
SMARCA4-204ENST00000444061 SH3RF1Q7Z6J0 888 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 FAM114A2Q9NRY5 505 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 KRT82Q9NSB4 513 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 ST8SIA6P61647 398 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 PIGHQ14442 188 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 TRIP13Q15645 432 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 PKN2Q16513 984 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 KRT71Q3SY84 523 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 SKA2Q8WVK7 121 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 AP1M1Q9BXS5 423 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 BARX2Q9UMQ3 279 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 Q9Y3F1 56 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 CHD4Q14839 1912 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 COL2A1P02458 1487 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 GTPBP10A4D1E9 387 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 ADCY6O43306 1168 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 FGBP02675 491 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 B4GALNT4Q76KP1 1039 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 ITIH5Q86UX2 942 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 FAM76AQ8TAV0 307 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 LPPQ93052 612 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 TRIM7Q9C029 511 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 RNF19AQ9NV58 838 aa14.86□□□□□ -0.03
SMARCA4-204ENST00000444061 B4GALT5O43286 388 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 PMS1P54277 932 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 ZNF792Q3KQV3 632 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 CHSY1Q86X52 802 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 TRPV6Q9H1D0 765 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 PNMA6AP0CW24 399 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 ARF4P18085 180 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 EEF1DP3Q658K8 133 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 SYN2Q92777 582 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 SENP8Q96LD8 212 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 GDAP1L1Q96MZ0 367 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 KLC2Q9H0B6 622 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 GIT1Q9Y2X7 761 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 ACAT1P24752 427 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 CASP5P51878 434 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 ZBTB16Q05516 673 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 NT5DC1Q5TFE4 455 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 HEATR6Q6AI08 1181 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 RBM43Q6ZSC3 357 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 UROC1Q96N76 676 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 C11orf49Q9H6J7 331 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.85□□□□□ -0.031e-6■■■■□ 25.1
SMARCA4-204ENST00000444061 PADI3Q9ULW8 664 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 GABRQQ9UN88 632 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 ZNF235Q14590 738 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 NAB2Q15742 525 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 CCDC121Q6ZUS5 278 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 ATRIPQ8WXE1 791 aa14.85□□□□□ -0.03
SMARCA4-204ENST00000444061 FAM237AA0A1B0GTK4 181 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 CCDC188H7C350 402 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 SAT1P21673 171 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 GPD1P21695 349 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 LBX1P52954 281 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 MYH2Q9UKX2 1941 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 THSD7AQ9UPZ6 1657 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 GYPCP04921 128 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 CA4P22748 312 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 PPM1AP35813 382 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 PLTPP55058 493 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 CDR2Q01850 454 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 TLE2Q04725 743 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 ARHGAP1Q07960 439 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 ZNF211Q13398 564 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 HINFPQ9BQA5 517 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 FSD1LQ9BXM9 530 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 MRPL17Q9NRX2 175 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 ABCA3Q99758 1704 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 ANO9A1A5B4 782 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 SLC2A3P11169 496 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 MBL2P11226 248 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 HPDP32754 393 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 NDST1P52848 882 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 THOC5Q13769 683 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 ECM1Q16610 540 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 APBB2Q92870 758 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 SLC35C1Q96A29 364 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 IFT43Q96FT9 208 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms