RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 RTP3Q9BQQ7 232 aa13.23□□□□□ -0.29
USP1-203ENST00000442679 APOL5Q9BWW9 433 aa13.23□□□□□ -0.29
USP1-203ENST00000442679 PLEKHA4Q9H4M7 779 aa13.23□□□□□ -0.29
USP1-203ENST00000442679 VRTNQ9H8Y1 702 aa13.23□□□□□ -0.29
USP1-203ENST00000442679 NXF1Q9UBU9 619 aaKnown RBP13.23□□□□□ -0.29
USP1-203ENST00000442679 WDR27A2RRH5 827 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 ABLIM3O94929 683 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 LETM1O95202 739 aaPredicted RBP13.22□□□□□ -0.29
USP1-203ENST00000442679 CPB1P15086 417 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 LHX1P48742 406 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 MXI1P50539 228 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 MARSP56192 900 aaKnown RBP13.22□□□□□ -0.29
USP1-203ENST00000442679 TYRO3Q06418 890 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 CBWD6Q4V339 395 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 ZNF667Q5HYK9 610 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 CBWD3Q5JTY5 395 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 CBWD5Q5RIA9 395 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 RARS2Q5T160 578 aaKnown RBP13.22□□□□□ -0.29
USP1-203ENST00000442679 TPGS2Q68CL5 300 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 TRIM59Q8IWR1 403 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.22□□□□□ -0.29
USP1-203ENST00000442679 OR10T2Q8NGX3 314 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.22□□□□□ -0.29
USP1-203ENST00000442679 TMEM209Q96SK2 561 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 S1PR5Q9H228 398 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.29
USP1-203ENST00000442679 FBXW11Q9UKB1 542 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 POLIQ9UNA4 740 aa13.22□□□□□ -0.29
USP1-203ENST00000442679 GABRDO14764 452 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 ASS1P00966 412 aaKnown RBP13.21□□□□□ -0.29
USP1-203ENST00000442679 FAM163BP0C2L3 166 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 OR4Q2P0C623 313 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 P4HA1P13674 534 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 ELF1P32519 619 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 GNL1P36915 607 aaPredicted RBP13.21□□□□□ -0.29
USP1-203ENST00000442679 MYL7Q01449 175 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 GPR17Q13304 367 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 PUS10Q3MIT2 529 aaKnown RBP13.21□□□□□ -0.29
USP1-203ENST00000442679 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 SPOPLQ6IQ16 392 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 PTCRAQ6ISU1 281 aaPredicted RBP13.21□□□□□ -0.29
USP1-203ENST00000442679 TMC5Q6UXY8 1006 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 RNF19BQ6ZMZ0 732 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 C11orf57Q6ZUT1 292 aaPredicted RBP13.21□□□□□ -0.29
USP1-203ENST00000442679 OSTM1Q86WC4 334 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 IRF2BP1Q8IU81 584 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 FBXL13Q8NEE6 735 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 SPATA18Q8TC71 538 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 ENOX1Q8TC92 643 aaKnown RBP13.21□□□□□ -0.29
USP1-203ENST00000442679 KBTBD7Q8WVZ9 684 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 CNOT6LQ96LI5 555 aaKnown RBP13.21□□□□□ -0.29
USP1-203ENST00000442679 ASB2Q96Q27 587 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 ACBD6Q9BR61 282 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 PI4K2AQ9BTU6 479 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 IMPG2Q9BZV3 1241 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 ZCWPW1Q9H0M4 648 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 ADAM7Q9H2U9 754 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 SNX25Q9H3E2 840 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 THAP9Q9H5L6 903 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 SFXN1Q9H9B4 322 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 RAB20Q9NX57 234 aa13.21□□□□□ -0.29
USP1-203ENST00000442679 DDX43Q9NXZ2 648 aaKnown RBP13.21□□□□□ -0.29
USP1-203ENST00000442679 AFF4Q9UHB7 1163 aaKnown RBP13.21□□□□□ -0.29
USP1-203ENST00000442679 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.21□□□□□ -0.29
USP1-203ENST00000442679 VWA8A3KMH1 1905 aa13.21□□□□□ -0.3
USP1-203ENST00000442679 CCDC195A0A1B0GUA6 201 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 GRXCR2A6NFK2 248 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 PRRG1O14668 218 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 MBTPS2O43462 519 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 LRRN2O75325 713 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 TACC1O75410 805 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 RFPL2O75678 378 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 ZMYND10O75800 440 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 SEC24AO95486 1093 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 PDGFRBP09619 1106 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 ATF2P15336 505 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 WARSP23381 471 aaKnown RBP13.2□□□□□ -0.3
USP1-203ENST00000442679 ACAT1P24752 427 aaKnown RBP13.2□□□□□ -0.3
USP1-203ENST00000442679 PCSK1P29120 753 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 MTIF2P46199 727 aaKnown RBP13.2□□□□□ -0.3
USP1-203ENST00000442679 FMO5P49326 533 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 KCNQ1P51787 676 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 CDH8P55286 799 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 TSPY1Q01534 308 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 ITIH3Q06033 890 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 ADCY1Q08828 1119 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 KCNH2Q12809 1159 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 SMAD4Q13485 552 aaKnown RBP13.2□□□□□ -0.3
USP1-203ENST00000442679 UVSSAQ2YD98 709 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 SLC39A12Q504Y0 691 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 CES5AQ6NT32 575 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 SCARA5Q6ZMJ2 495 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 CCDC149Q6ZUS6 474 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 FAM114A1Q8IWE2 563 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 DCP1BQ8IZD4 617 aaKnown RBP13.2□□□□□ -0.3
USP1-203ENST00000442679 SMRP1Q8NCR6 262 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 SLC7A14Q8TBB6 771 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 SEMA4DQ92854 862 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms