RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 TFR2Q9UP52 801 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 PRG3Q9Y2Y8 225 aaPredicted RBP10.69□□□□□ -0.7
CBX5-202ENST00000439541 DAAM1Q9Y4D1 1078 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 NME7Q9Y5B8 376 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 LAMA2P24043 3122 aaKnown RBP10.69□□□□□ -0.7
CBX5-202ENST00000439541 KPNA7A9QM74 516 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 ZNF263O14978 683 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 STAU1O95793 577 aaKnown RBP10.68□□□□□ -0.7
CBX5-202ENST00000439541 PRKCIP41743 596 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 KIF11P52732 1056 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 CYP27A1Q02318 531 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 RNASELQ05823 741 aaKnown RBP10.68□□□□□ -0.7
CBX5-202ENST00000439541 FPGSQ05932 587 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 GFPT1Q06210 699 aaPredicted RBP10.68□□□□□ -0.7
CBX5-202ENST00000439541 DSC1Q08554 894 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 SV2CQ496J9 727 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 TMTC1Q8IUR5 882 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 LNX1Q8TBB1 728 aaPredicted RBP10.68□□□□□ -0.7
CBX5-202ENST00000439541 TSPAN18Q96SJ8 248 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 DEF6Q9H4E7 631 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 NOCTQ9UK39 431 aaKnown RBP10.68□□□□□ -0.7
CBX5-202ENST00000439541 L1RE1Q9UN81 338 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 REXO2Q9Y3B8 237 aaKnown RBP10.68□□□□□ -0.7
CBX5-202ENST00000439541 TSC2P49815 1807 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 A0A087X0T9 212 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 ZBBXA8MT70 800 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 B3GAT3O94766 335 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 NDUFA10O95299 355 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 TUBBP07437 444 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 CFHP08603 1231 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 FAM228BP0C875 321 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 CYP11B1P15538 503 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 BRCC3P46736 316 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 CDR1P51861 262 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 ZNF132P52740 706 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 CDK17Q00537 523 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 CCDC142Q17RM4 750 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 SOWAHAQ2M3V2 549 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 CD300LGQ6UXG3 332 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 ZNF365Q70YC5 407 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 RSRC2Q7L4I2 434 aaKnown RBP10.68□□□□□ -0.7
CBX5-202ENST00000439541 GLYCTKQ8IVS8 523 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 COLGALT2Q8IYK4 626 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 CEP112Q8N8E3 955 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 WHAMMQ8TF30 809 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 KBTBD7Q8WVZ9 684 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 CCDC42Q96M95 316 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 SYT11Q9BT88 431 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.68□□□□□ -0.7
CBX5-202ENST00000439541 ELOVL4Q9GZR5 314 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 ARFGAP3Q9NP61 516 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 SEPT11Q9NVA2 429 aaKnown RBP10.68□□□□□ -0.7
CBX5-202ENST00000439541 CXXC1Q9P0U4 656 aaPredicted RBP10.68□□□□□ -0.7
CBX5-202ENST00000439541 MYO1AQ9UBC5 1043 aa10.68□□□□□ -0.7
CBX5-202ENST00000439541 TIMM13Q9Y5L4 95 aaPredicted RBP10.68□□□□□ -0.7
CBX5-202ENST00000439541 ABHD14A-ACY1A0A1B0GW23 586 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 DDX3XO00571 662 aaKnown RBP eCLIP10.67□□□□□ -0.72e-11■■□□□ 11.8
CBX5-202ENST00000439541 AKR1B10O60218 316 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 CILPO75339 1184 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 PFKMP08237 780 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 MMEP08473 750 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 P4HA1P13674 534 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 CHRNB2P17787 502 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 BRD2P25440 801 aaKnown RBP10.67□□□□□ -0.7
CBX5-202ENST00000439541 PNPLA4P41247 253 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 OR1G1P47890 313 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 PDE6CP51160 858 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 NDST1P52848 882 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 BCAR1P56945 870 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 PPIGQ13427 754 aaKnown RBP eCLIP10.67□□□□□ -0.7
CBX5-202ENST00000439541 BRD3Q15059 726 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 ASTE1Q2TB18 679 aaPredicted RBP10.67□□□□□ -0.7
CBX5-202ENST00000439541 TIGD5Q53EQ6 642 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 OSTM1Q86WC4 334 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 TMEM173Q86WV6 379 aaPredicted RBP10.67□□□□□ -0.7
CBX5-202ENST00000439541 RPUSD2Q8IZ73 545 aaKnown RBP10.67□□□□□ -0.7
CBX5-202ENST00000439541 LRRN4CLQ8ND94 238 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 FAM81BQ96LP2 452 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 WDR24Q96S15 920 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 LPIN3Q9BQK8 851 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 ZSWIM1Q9BR11 485 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.67□□□□□ -0.7
CBX5-202ENST00000439541 HTATIP2Q9BUP3 242 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 NRDE2Q9H7Z3 1164 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 ADAMTS1Q9UHI8 967 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 PUF60Q9UHX1 559 aaKnown RBP10.67□□□□□ -0.7
CBX5-202ENST00000439541 CNTN6Q9UQ52 1028 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 ADGRG1Q9Y653 693 aa10.67□□□□□ -0.7
CBX5-202ENST00000439541 FNDC1Q4ZHG4 1894 aaPredicted RBP10.67□□□□□ -0.7
CBX5-202ENST00000439541 SSU72P8A0A1W2PR75 194 aa10.66□□□□□ -0.7
CBX5-202ENST00000439541 CYB561D2O14569 222 aa10.66□□□□□ -0.7
CBX5-202ENST00000439541 FANCGO15287 622 aa10.66□□□□□ -0.7
CBX5-202ENST00000439541 DGKIO75912 1065 aa10.66□□□□□ -0.7
CBX5-202ENST00000439541 AMHP03971 560 aa10.66□□□□□ -0.7
CBX5-202ENST00000439541 GNA15P30679 374 aa10.66□□□□□ -0.7
CBX5-202ENST00000439541 RPL9P32969 192 aaKnown RBP10.66□□□□□ -0.7
CBX5-202ENST00000439541 SLC11A1P49279 550 aa10.66□□□□□ -0.7
CBX5-202ENST00000439541 RAD23BP54727 409 aa10.66□□□□□ -0.7
CBX5-202ENST00000439541 INCA1Q0VD86 236 aa10.66□□□□□ -0.7
CBX5-202ENST00000439541 WSCD1Q658N2 575 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms