RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 DCPSQ96C86 337 aaKnown RBP6.68□□□□□ -1.34
BDNF-211ENST00000439476 SEMA4AQ9H3S1 761 aa6.68□□□□□ -1.34
BDNF-211ENST00000439476 TRABDQ9H4I3 376 aa6.68□□□□□ -1.34
BDNF-211ENST00000439476 XAB2Q9HCS7 855 aaKnown RBP6.68□□□□□ -1.34
BDNF-211ENST00000439476 USP21Q9UK80 565 aa6.68□□□□□ -1.34
BDNF-211ENST00000439476 SLC8A2Q9UPR5 921 aa6.68□□□□□ -1.34
BDNF-211ENST00000439476 CHMP2BQ9UQN3 213 aa6.68□□□□□ -1.34
BDNF-211ENST00000439476 RIC1Q4ADV7 1423 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 FLT1P17948 1338 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 FAM47DPA6NHR8 397 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 FAM196BA6NMK8 535 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 P4HBP07237 508 aaKnown RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 RARGP13631 454 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 NPR1P16066 1061 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 XPAP23025 273 aaPredicted RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 ARFIP2P53365 341 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 MRPL28Q13084 256 aaKnown RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 GRAMD1BQ3KR37 738 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 SPDYE2Q495Y8 402 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 ZC2HC1CQ53FD0 456 aaPredicted RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 LONP2Q86WA8 852 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 TEX9Q8N6V9 391 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 TNFRSF25Q93038 417 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 FAF2Q96CS3 445 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 JMJD4Q9H9V9 463 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 TUFT1Q9NNX1 390 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 IL17RBQ9NRM6 502 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 PPARGC1AQ9UBK2 798 aaKnown RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 SFMBT1Q9UHJ3 866 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 L3MBTL1Q9Y468 752 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 A0A0A6YYK5 440 aaPredicted RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 HNRNPRO43390 633 aaKnown RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 ATP4AP20648 1035 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 RPA1P27694 616 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 CASP4P49662 377 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 PTENP60484 403 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 MAP3K10Q02779 954 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 RARS2Q5T160 578 aaKnown RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 BTNL9Q6UXG8 535 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 C11orf74Q86VG3 221 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 RTKN2Q8IZC4 609 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 GALNT15Q8N3T1 639 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 RNF139Q8WU17 664 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 SERPINB12Q96P63 405 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 INPP4AQ96PE3 977 aaPredicted RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 NUDT12Q9BQG2 462 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 C11orf70Q9BRQ4 267 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 ADAM33Q9BZ11 813 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 TRIM45Q9H8W5 580 aaPredicted RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 ZWILCHQ9H900 591 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 PNMA3Q9UL41 463 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 PRR12Q9ULL5 1215 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 CORO1CQ9ULV4 474 aaPredicted RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 C2CD2Q9Y426 696 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 SNX5Q9Y5X3 404 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 AKAP12Q02952 1782 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 ATMINO43313 823 aaPredicted RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 SRGAP2CP0DJJ0 459 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 SERPINB9P50453 376 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 IFI35P80217 286 aaPredicted RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 CDC42EP1Q00587 391 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 GPS1Q13098 491 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 MORF4L2Q15014 288 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 C6orf183Q5T699 404 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 TRIM67Q6ZTA4 783 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 CYFIP1Q7L576 1253 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 SESTD1Q86VW0 696 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 CATSPER3Q86XQ3 398 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 SLC13A5Q86YT5 568 aaPredicted RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 ZBED8Q8IZ13 594 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 MAB21L3Q8N8X9 362 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 NKX2-3Q8TAU0 364 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 ACAP3Q96P50 834 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 RBM15Q96T37 977 aaKnown RBP eCLIP6.67□□□□□ -1.34
BDNF-211ENST00000439476 LBHD1Q9BQE6 289 aaPredicted RBP6.67□□□□□ -1.34
BDNF-211ENST00000439476 BFARQ9NZS9 450 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 NARFQ9UHQ1 456 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 MOSPD1Q9UJG1 213 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 ATRNO75882 1429 aa6.67□□□□□ -1.34
BDNF-211ENST00000439476 CYTH3O43739 400 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 AKAP3O75969 853 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 PHKA2P46019 1235 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ELF3P78545 371 aaPredicted RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 OCRLQ01968 901 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 KCNMA1Q12791 1236 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 MAPK6Q16659 721 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 FAM196AQ6ZSG2 479 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 PRUNE1Q86TP1 453 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 SETD3Q86TU7 594 aaPredicted RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 PASD1Q8IV76 773 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ABI1Q8IZP0 508 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 C4orf33Q8N1A6 199 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 GLIS3Q8NEA6 775 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 SLC30A5Q8TAD4 765 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 CMTM5Q96DZ9 223 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ZSWIM1Q9BR11 485 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 MKNK1Q9BUB5 465 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 MAFFQ9ULX9 164 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 AKT3Q9Y243 479 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms