RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 AP1G2O75843 785 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 CST9Q5W186 159 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 C4orf32Q8N8J7 132 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 ACO2Q99798 780 aaKnown RBP13.63□□□□□ -0.23
PTCH1-207ENST00000429896 PCSK1NQ9UHG2 260 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 ITIH6Q6UXX5 1313 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 AKAP3O75969 853 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 IRF1P10914 325 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 NFKBIAP25963 317 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 RAP1GAPP47736 663 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 TTI2Q6NXR4 508 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 TMEM161BQ8NDZ6 487 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 IPO11Q9UI26 975 aaKnown RBP13.63□□□□□ -0.23
PTCH1-207ENST00000429896 TM4SF4P48230 202 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 ACOT1Q86TX2 421 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 SIK2Q9H0K1 926 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 DDX60Q8IY21 1712 aaKnown RBP13.63□□□□□ -0.23
PTCH1-207ENST00000429896 PASKQ96RG2 1323 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 VDRP11473 427 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 CTNNB1P35222 781 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 GJA5P36382 358 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 ATP1A2P50993 1020 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 ETF1P62495 437 aaKnown RBP13.63□□□□□ -0.23
PTCH1-207ENST00000429896 PTPN11Q06124 597 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-207ENST00000429896 IQCB1Q15051 598 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 MYLK4Q86YV6 388 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-207ENST00000429896 UNC93B1Q9H1C4 597 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 PLEKHA5Q9HAU0 1116 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 ENC1O14682 589 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 RBBP5Q15291 538 aaKnown RBP13.62□□□□□ -0.23
PTCH1-207ENST00000429896 HYIQ5T013 277 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 HHIPL1Q96JK4 782 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 PGAP2Q9UHJ9 254 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 MAD1L1Q9Y6D9 718 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 HMBSP08397 361 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 ARHGAP1Q07960 439 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 NR1I3Q14994 352 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 C17orf99Q6UX52 265 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 NDUFAF2Q8N183 169 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 ARFGAP2Q8N6H7 521 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 DDX43Q9NXZ2 648 aaKnown RBP13.62□□□□□ -0.23
PTCH1-207ENST00000429896 NAGPAQ9UK23 515 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 KRT7P08729 469 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 NCKAP1LP55160 1127 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 TFDP2Q14188 446 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 MMS22LQ6ZRQ5 1243 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 CACNA2D3Q8IZS8 1091 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 HOMER3Q9NSC5 361 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 TNRC6CQ9HCJ0 1690 aaKnown RBP13.62□□□□□ -0.23
PTCH1-207ENST00000429896 H3BRJ5 948 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 ARVCFO00192 962 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 DARSP14868 501 aaKnown RBP13.62□□□□□ -0.23
PTCH1-207ENST00000429896 EPHB1P54762 984 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 NFE2Q16621 373 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-207ENST00000429896 ITIH5Q86UX2 942 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 RIN2Q8WYP3 895 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-207ENST00000429896 GIT1Q9Y2X7 761 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 MIF4GDA9UHW6 222 aaKnown RBP13.62□□□□□ -0.23
PTCH1-207ENST00000429896 PGRMC1O00264 195 aaKnown RBP13.62□□□□□ -0.23
PTCH1-207ENST00000429896 EFHC1Q5JVL4 640 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 TSEN34Q9BSV6 310 aaKnown RBP13.62□□□□□ -0.23
PTCH1-207ENST00000429896 VCX3BQ9H321 246 aa13.62□□□□□ -0.23
PTCH1-207ENST00000429896 DDX56Q9NY93 547 aaKnown RBP13.62□□□□□ -0.23
PTCH1-207ENST00000429896 TJP3O95049 919 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 SNX1Q13596 522 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 MDH1BQ5I0G3 518 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 C10orf120Q5SQS8 335 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 GJB7Q6PEY0 223 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 EFCAB13Q8IY85 973 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 MAGOHBQ96A72 148 aaKnown RBP13.61□□□□□ -0.23
PTCH1-207ENST00000429896 ARHGAP39Q9C0H5 1083 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 TRMT13Q9NUP7 481 aaKnown RBP13.61□□□□□ -0.23
PTCH1-207ENST00000429896 ORC1Q13415 861 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 TAS1R2Q8TE23 839 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 LPPQ93052 612 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 A0A1W2PQJ5 194 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 PON1P27169 355 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 ECM1Q16610 540 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 RNF217Q8TC41 542 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 TRIM56Q9BRZ2 755 aaKnown RBP13.61□□□□□ -0.23
PTCH1-207ENST00000429896 JRKLQ9Y4A0 524 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 PCDHB5Q9Y5E4 795 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 TIMM13Q9Y5L4 95 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-207ENST00000429896 WNT7AO00755 349 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 IGFBP4P22692 258 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 CREMQ03060 361 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 KRT71Q3SY84 523 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 TRIM65Q6PJ69 517 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 SLC30A5Q8TAD4 765 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 DHX35Q9H5Z1 703 aaKnown RBP13.61□□□□□ -0.23
PTCH1-207ENST00000429896 KRT82Q9NSB4 513 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 ZBED1O96006 694 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 ZNF200P98182 395 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-207ENST00000429896 MRPS31Q92665 395 aaKnown RBP13.61□□□□□ -0.23
PTCH1-207ENST00000429896 CYP4F11Q9HBI6 524 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 PLCB1Q9NQ66 1216 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 WNK3Q9BYP7 1800 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 EFCAB8A8MWE9 144 aa13.61□□□□□ -0.23
PTCH1-207ENST00000429896 CLTBP09497 229 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms