RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 CDH8P55286 799 aa17.21■□□□□ 0.34
MBD4-203ENST00000429544 ORC1Q13415 861 aa17.21■□□□□ 0.34
MBD4-203ENST00000429544 SKIDA1Q1XH10 827 aa17.21■□□□□ 0.34
MBD4-203ENST00000429544 WDR72Q3MJ13 1102 aa17.21■□□□□ 0.34
MBD4-203ENST00000429544 DENND1BQ6P3S1 775 aa17.21■□□□□ 0.34
MBD4-203ENST00000429544 RUFY4Q6ZNE9 571 aa17.21■□□□□ 0.34
MBD4-203ENST00000429544 IFNLR1Q8IU57 520 aaPredicted RBP17.21■□□□□ 0.34
MBD4-203ENST00000429544 SDCBP2Q9H190 292 aa17.21■□□□□ 0.34
MBD4-203ENST00000429544 EPB41L4BQ9H329 900 aa17.21■□□□□ 0.34
MBD4-203ENST00000429544 TUT1Q9H6E5 874 aaKnown RBP17.21■□□□□ 0.34
MBD4-203ENST00000429544 PCDHGC3Q9UN70 934 aa17.21■□□□□ 0.34
MBD4-203ENST00000429544 CEP83Q9Y592 693 aa17.21■□□□□ 0.34
MBD4-203ENST00000429544 ZEB2O60315 1214 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 TCF4P15884 667 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 SMPD1P17405 629 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 HPDP32754 393 aaPredicted RBP17.2■□□□□ 0.34
MBD4-203ENST00000429544 IFFO1Q0D2I5 559 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 ZNF252P-AS1Q0IIN9 211 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 KRT71Q3SY84 523 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 SPDYCQ5MJ68 293 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 ERICH1Q86X53 443 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 SMYD3Q9H7B4 428 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 CWC15Q9P013 229 aaKnown RBP17.2■□□□□ 0.34
MBD4-203ENST00000429544 CITO14578 2027 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 TCRBV5S1A1TA0A578 114 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 UNCXA6NJT0 531 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 CDH5P33151 784 aaPredicted RBP17.2■□□□□ 0.34
MBD4-203ENST00000429544 DCUN1D2Q6PH85 259 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 OR6J1Q8NGC5 347 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 SLCO2A1Q92959 643 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 ART4Q93070 314 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 MAML3Q96JK9 1138 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 FAM118BQ9BPY3 351 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 BCO2Q9BYV7 579 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 OSBPL8Q9BZF1 889 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 ZNF518BQ9C0D4 1074 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 RABEP2Q9H5N1 569 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 ASIC3Q9UHC3 531 aa17.2■□□□□ 0.34
MBD4-203ENST00000429544 EIF3HO15372 352 aaKnown RBP eCLIP17.19■□□□□ 0.34
MBD4-203ENST00000429544 PPFIA4O75335 1185 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 OGDHQ02218 1023 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 GRB14Q14449 540 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 GRIK4Q16099 956 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 ATP13A4Q4VNC1 1196 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 ANKS1BQ7Z6G8 1248 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 EXD1Q8NHP7 514 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 RNF25Q96BH1 459 aaPredicted RBP17.19■□□□□ 0.34
MBD4-203ENST00000429544 CCDC114Q96M63 670 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 PABPC3Q9H361 631 aaKnown RBP17.19■□□□□ 0.34
MBD4-203ENST00000429544 PI4K2BG5E9Z4 385 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 SHBGP04278 402 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 MMP3P08254 477 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 EIF4BP23588 611 aaKnown RBP17.19■□□□□ 0.34
MBD4-203ENST00000429544 KLF1Q13351 362 aaPredicted RBP17.19■□□□□ 0.34
MBD4-203ENST00000429544 SLC10A6Q3KNW5 377 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 ZFYVE27Q5T4F4 411 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 DENND2CQ68D51 928 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 HMGXB4Q9UGU5 601 aa17.19■□□□□ 0.34
MBD4-203ENST00000429544 TSPAN1O60635 241 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 ECM2O94769 699 aaPredicted RBP17.18■□□□□ 0.34
MBD4-203ENST00000429544 RAD23BP54727 409 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 CALCOCO2Q13137 446 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 TRIP13Q15645 432 aaPredicted RBP17.18■□□□□ 0.34
MBD4-203ENST00000429544 DUSP28Q4G0W2 176 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 MARCH8Q5T0T0 291 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 UBAP2Q5T6F2 1119 aaKnown RBP17.18■□□□□ 0.34
MBD4-203ENST00000429544 AGBL2Q5U5Z8 902 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 GRK7Q8WTQ7 553 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 GBA2Q9HCG7 927 aaPredicted RBP17.18■□□□□ 0.34
MBD4-203ENST00000429544 F8VP50 259 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 GOLGA8SH3BPF8 625 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 KRT1P04264 644 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 FGFR4P22455 802 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 POLR2BP30876 1174 aaKnown RBP17.18■□□□□ 0.34
MBD4-203ENST00000429544 EIF3BP55884 814 aaKnown RBP17.18■□□□□ 0.34
MBD4-203ENST00000429544 GUCY1A3Q02108 690 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 PTK6Q13882 451 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 TMEM132DQ14C87 1099 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 PTPN20Q4JDL3 420 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 PPP1R15BQ5SWA1 713 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 PLEKHH3Q7Z736 793 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 CCDC25Q86WR0 208 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 CXorf38Q8TB03 319 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 TWNKQ96RR1 684 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 TJP2Q9UDY2 1190 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 CYTH4Q9UIA0 394 aa17.18■□□□□ 0.34
MBD4-203ENST00000429544 TRIP11Q15643 1979 aa17.17■□□□□ 0.34
MBD4-203ENST00000429544 ADCY6O43306 1168 aa17.17■□□□□ 0.34
MBD4-203ENST00000429544 MED7O43513 233 aa17.17■□□□□ 0.34
MBD4-203ENST00000429544 ACVR2BQ13705 512 aa17.17■□□□□ 0.34
MBD4-203ENST00000429544 EMC10Q5UCC4 262 aa17.17■□□□□ 0.34
MBD4-203ENST00000429544 C3orf20Q8ND61 904 aa17.17■□□□□ 0.34
MBD4-203ENST00000429544 NPLOC4Q8TAT6 608 aa17.17■□□□□ 0.34
MBD4-203ENST00000429544 PARK7Q99497 189 aaKnown RBP17.17■□□□□ 0.34
MBD4-203ENST00000429544 TINF2Q9BSI4 451 aa17.17■□□□□ 0.34
MBD4-203ENST00000429544 SEMA4AQ9H3S1 761 aa17.17■□□□□ 0.34
MBD4-203ENST00000429544 ASB7Q9H672 318 aa17.17■□□□□ 0.34
MBD4-203ENST00000429544 NOVA2Q9UNW9 492 aaKnown RBP17.17■□□□□ 0.34
MBD4-203ENST00000429544 GAS8O95995 478 aa17.16■□□□□ 0.34
MBD4-203ENST00000429544 NUDT17P0C025 328 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms