RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 SMAD4Q13485 552 aaKnown RBP16.9■□□□□ 0.3
BRAT1-202ENST00000421712 ZNF667Q5HYK9 610 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 PPM1LQ5SGD2 360 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 RBM43Q6ZSC3 357 aaKnown RBP16.9■□□□□ 0.3
BRAT1-202ENST00000421712 DPH6Q7L8W6 267 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 ZNF461Q8TAF7 563 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 HDAC7Q8WUI4 952 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 ELMO3Q96BJ8 720 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 PGLYRP2Q96PD5 576 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 SNX25Q9H3E2 840 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 PIDD1Q9HB75 910 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 CYP4F11Q9HBI6 524 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 ANO10Q9NW15 660 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 DDX43Q9NXZ2 648 aaKnown RBP16.9■□□□□ 0.3
BRAT1-202ENST00000421712 PLXNA3P51805 1871 aa16.9■□□□□ 0.3
BRAT1-202ENST00000421712 MBTPS2O43462 519 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 RFPL2O75678 378 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 C8AP07357 584 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 WEE2P0C1S8 567 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 ERCC5P28715 1186 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-202ENST00000421712 LHX1P48742 406 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 MXI1P50539 228 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 TSPY1Q01534 308 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 ITIH3Q06033 890 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 ADCY1Q08828 1119 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 SOWAHAQ2M3V2 549 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 ATAT1Q5SQI0 421 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 TPGS2Q68CL5 300 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 RNF19BQ6ZMZ0 732 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 C15orf39Q6ZRI6 1047 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 CCDC149Q6ZUS6 474 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 SMRP1Q8NCR6 262 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 OR6B3Q8NGW1 331 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 SLC7A14Q8TBB6 771 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 TAS1R2Q8TE23 839 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 TMEM209Q96SK2 561 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 PI4K2AQ9BTU6 479 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 XYLT2Q9H1B5 865 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 S1PR5Q9H228 398 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 ADAM7Q9H2U9 754 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 FBXW11Q9UKB1 542 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 POLIQ9UNA4 740 aa16.89■□□□□ 0.29
BRAT1-202ENST00000421712 USP15Q9Y4E8 981 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-202ENST00000421712 GRXCR2A6NFK2 248 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 ABLIM3O94929 683 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 STAU1O95793 577 aaKnown RBP16.88■□□□□ 0.29
BRAT1-202ENST00000421712 PDGFRBP09619 1106 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 ATF2P15336 505 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 ACAT1P24752 427 aaKnown RBP16.88■□□□□ 0.29
BRAT1-202ENST00000421712 GNL1P36915 607 aaPredicted RBP16.88■□□□□ 0.29
BRAT1-202ENST00000421712 CDR1P51861 262 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 STX1AQ16623 288 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 KLHL40Q2TBA0 621 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 SLC39A12Q504Y0 691 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 CT47A1Q5JQC4 288 aaPredicted RBP16.88■□□□□ 0.29
BRAT1-202ENST00000421712 WDR44Q5JSH3 913 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 TJAP1Q5JTD0 557 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 SCARA5Q6ZMJ2 495 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 DCP1BQ8IZD4 617 aaKnown RBP16.88■□□□□ 0.29
BRAT1-202ENST00000421712 OR10T2Q8NGX3 314 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 TAF4BQ92750 862 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 RIPOR3Q96MK2 946 aa16.88■□□□□ 0.29
BRAT1-202ENST00000421712 MAGEC2Q9UBF1 373 aaPredicted RBP16.88■□□□□ 0.29
BRAT1-202ENST00000421712 AFF4Q9UHB7 1163 aaKnown RBP16.88■□□□□ 0.29
BRAT1-202ENST00000421712 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.88■□□□□ 0.29
BRAT1-202ENST00000421712 MTCL1Q9Y4B5 1905 aaKnown RBP16.88■□□□□ 0.29
BRAT1-202ENST00000421712 ZMYND10O75800 440 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 IL9P15248 144 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 PCSK1P29120 753 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 MTHFRP42898 656 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 MTIF2P46199 727 aaKnown RBP16.87■□□□□ 0.29
BRAT1-202ENST00000421712 CETN1Q12798 172 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 GPR17Q13304 367 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 UVSSAQ2YD98 709 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 CBWD6Q4V339 395 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 CBWD3Q5JTY5 395 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 CBWD5Q5RIA9 395 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 SPOPLQ6IQ16 392 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 FAM114A1Q8IWE2 563 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 FBXL13Q8NEE6 735 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 SPATA18Q8TC71 538 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 SMG7Q92540 1137 aaKnown RBP16.87■□□□□ 0.29
BRAT1-202ENST00000421712 SLC35C1Q96A29 364 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 RTP3Q9BQQ7 232 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 ACBD6Q9BR61 282 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 MRPL45Q9BRJ2 306 aaKnown RBP16.87■□□□□ 0.29
BRAT1-202ENST00000421712 ZCWPW1Q9H0M4 648 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 VRTNQ9H8Y1 702 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 RAB20Q9NX57 234 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 ZDHHC7Q9NXF8 308 aa16.87■□□□□ 0.29
BRAT1-202ENST00000421712 TCF20Q9UGU0 1960 aaKnown RBP16.87■□□□□ 0.29
BRAT1-202ENST00000421712 CCL16O15467 120 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 N4BP1O75113 896 aaKnown RBP16.86■□□□□ 0.29
BRAT1-202ENST00000421712 LETM1O95202 739 aaPredicted RBP16.86■□□□□ 0.29
BRAT1-202ENST00000421712 SEC24AO95486 1093 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 ASS1P00966 412 aaKnown RBP16.86■□□□□ 0.29
BRAT1-202ENST00000421712 LRG1P02750 347 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 BMP1P13497 986 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 WARSP23381 471 aaKnown RBP16.86■□□□□ 0.29
BRAT1-202ENST00000421712 LMO2P25791 158 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms