RNA–Protein interactions for RNA: ENST00000418808.1

CNOT9-203, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-203ENST00000418808 VSTM4Q8IW00 320 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 FAM114A1Q8IWE2 563 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 ABI1Q8IZP0 508 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 GDPD5Q8WTR4 605 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 TFAP2BQ92481 460 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 SHC3Q92529 594 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 TIFAQ96CG3 184 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 UROC1Q96N76 676 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 CLSTN3Q9BQT9 956 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 ZBED2Q9BTP6 218 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 HERC2P3Q9BVR0 1158 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 LSM14BQ9BX40 385 aaKnown RBP9.04□□□□□ -0.96
CNOT9-203ENST00000418808 NIF3L1Q9GZT8 377 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 RXFP1Q9HBX9 757 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 SPG21Q9NZD8 308 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 SNX9Q9Y5X1 595 aa9.04□□□□□ -0.96
CNOT9-203ENST00000418808 PRRC2BQ5JSZ5 2229 aaKnown RBP9.04□□□□□ -0.96
CNOT9-203ENST00000418808 MYO9BQ13459 2157 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 MYBPHLA2RUH7 354 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 FOXN3O00409 490 aaPredicted RBP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 CYB561D2O14569 222 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 CILPO75339 1184 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 TACC1O75410 805 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 SOD2P04179 222 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 KRT19P08727 400 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 OR4Q2P0C623 313 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 UCHL3P15374 230 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 TYMPP19971 482 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 WARSP23381 471 aaKnown RBP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 ACAT1P24752 427 aaKnown RBP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 ATICP31939 592 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 CTNNB1P35222 781 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 GTF2F1P35269 517 aaKnown RBP eCLIP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 CLCN1P35523 988 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 UBASH3AP57075 661 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 GCNT1Q02742 428 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 UBXN1Q04323 297 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 RNASELQ05823 741 aaKnown RBP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 CUL2Q13617 745 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 SGSM1Q2NKQ1 1148 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 UVSSAQ2YD98 709 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 ZNF699Q32M78 642 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 VARS2Q5ST30 1063 aaKnown RBP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 HGSNATQ68CP4 663 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 LILRA6Q6PI73 481 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 WDR59Q6PJI9 974 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 SCARA5Q6ZMJ2 495 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 GBP6Q6ZN66 633 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 CREBRFQ8IUR6 639 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 TTC9BQ8N6N2 239 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 SLC4A11Q8NBS3 891 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 CACTINQ8WUQ7 758 aaKnown RBP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 POF1BQ8WVV4 589 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 PIK3R5Q8WYR1 880 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 DDX1Q92499 740 aaKnown RBP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 TGS1Q96RS0 853 aaKnown RBP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 PLVAPQ9BX97 442 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 RHOBTB2Q9BYZ6 727 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 MTIF3Q9H2K0 278 aaKnown RBP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 FAM207AQ9NSI2 230 aaPredicted RBP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 NXF1Q9UBU9 619 aaKnown RBP9.03□□□□□ -0.96
CNOT9-203ENST00000418808 APEX2Q9UBZ4 518 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 DNAJC12Q9UKB3 198 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 PCDHB8Q9UN66 801 aa9.03□□□□□ -0.96
CNOT9-203ENST00000418808 C2orf71A6NGG8 1288 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 TEX28O15482 410 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 RB1P06400 928 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 CNPP09543 421 aaKnown RBP9.02□□□□□ -0.97
CNOT9-203ENST00000418808 CTSAP10619 480 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 CHRNB2P17787 502 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 ALDH7A1P49419 539 aaKnown RBP9.02□□□□□ -0.97
CNOT9-203ENST00000418808 NDST1P52848 882 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 RAB30Q15771 203 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 PPP2R2DQ66LE6 453 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 FAM171BQ6P995 826 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.02□□□□□ -0.97
CNOT9-203ENST00000418808 IRF2BP2Q7Z5L9 587 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 PALB2Q86YC2 1186 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 FAM71AQ8IYT1 594 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 VPS52Q8N1B4 723 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 TOP6BLQ8N6T0 577 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 C12orf29Q8N999 325 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 ARNTL2Q8WYA1 636 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 TAF4BQ92750 862 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 MRFAP1L1Q96HT8 127 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 COLEC11Q9BWP8 271 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 ZNF576Q9H609 170 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 GRPEL1Q9HAV7 217 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 CISHQ9NSE2 258 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 CEP72Q9P209 647 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 MTRRQ9UBK8 725 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 FBXL5Q9UKA1 691 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 LZTS1Q9Y250 596 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 IRAK3Q9Y616 596 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 PLXNA3P51805 1871 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 BRWD1Q9NSI6 2320 aa9.02□□□□□ -0.97
CNOT9-203ENST00000418808 WDR27A2RRH5 827 aa9.01□□□□□ -0.97
CNOT9-203ENST00000418808 F8VZ95 297 aa9.01□□□□□ -0.97
CNOT9-203ENST00000418808 SYN3O14994 580 aa9.01□□□□□ -0.97
CNOT9-203ENST00000418808 STX10O60499 249 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms