RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 TRAPPC11Q7Z392 1133 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 GLYCTKQ8IVS8 523 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 ZC3H3Q8IXZ2 948 aaKnown RBP11.33□□□□□ -0.6
RFC1-203ENST00000418436 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 TRIML1Q8N9V2 468 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 CCDC127Q96BQ5 260 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 DHTKD1Q96HY7 919 aaPredicted RBP11.33□□□□□ -0.6
RFC1-203ENST00000418436 ZNF560Q96MR9 790 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 FNBP1Q96RU3 617 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 OXCT2Q9BYC2 517 aaPredicted RBP11.33□□□□□ -0.6
RFC1-203ENST00000418436 IRX2Q9BZI1 471 aaPredicted RBP11.33□□□□□ -0.6
RFC1-203ENST00000418436 ADAM7Q9H2U9 754 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 CLSTN2Q9H4D0 955 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 PLEKHA4Q9H4M7 779 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 MAN1C1Q9NR34 630 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 DPP7Q9UHL4 492 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 FBXL5Q9UKA1 691 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 FBXW11Q9UKB1 542 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 FAM50BQ9Y247 325 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 FRMD4BQ9Y2L6 1034 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 CDY1Q9Y6F8 540 aa11.33□□□□□ -0.6
RFC1-203ENST00000418436 DENND4AQ7Z401 1863 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 ARHGEF37A1IGU5 675 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 LRRIQ3A6PVS8 624 aaPredicted RBP11.32□□□□□ -0.6
RFC1-203ENST00000418436 CYB561D2O14569 222 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 ABLIM3O94929 683 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 C4BPAP04003 597 aaKnown RBP11.32□□□□□ -0.6
RFC1-203ENST00000418436 ODC1P11926 461 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 CCNE1P24864 410 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 PSMC2P35998 433 aaKnown RBP11.32□□□□□ -0.6
RFC1-203ENST00000418436 AP3M2P53677 418 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 PMS1P54277 932 aaKnown RBP11.32□□□□□ -0.6
RFC1-203ENST00000418436 ROR1Q01973 937 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 YWHAHQ04917 246 aaPredicted RBP11.32□□□□□ -0.6
RFC1-203ENST00000418436 LRRC63Q05C16 580 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 ITIH3Q06033 890 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 CAMK4Q16566 473 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 CTXN3Q4LDR2 81 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 CEP135Q66GS9 1140 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 ANKRD40Q6AI12 368 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 ZNF280DQ6N043 979 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 FOXR2Q6PJQ5 311 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 LIMS2Q7Z4I7 341 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 C12orf76Q8N812 135 aaPredicted RBP11.32□□□□□ -0.6
RFC1-203ENST00000418436 KREMEN2Q8NCW0 462 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 CMASQ8NFW8 434 aaPredicted RBP11.32□□□□□ -0.6
RFC1-203ENST00000418436 ZNF461Q8TAF7 563 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 MKNK1Q9BUB5 465 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 TMUB1Q9BVT8 246 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 RHOBTB2Q9BYZ6 727 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 SFXN1Q9H9B4 322 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 GDAP2Q9NXN4 497 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 DSEQ9UL01 958 aa11.32□□□□□ -0.6
RFC1-203ENST00000418436 USP15Q9Y4E8 981 aaPredicted RBP11.32□□□□□ -0.6
RFC1-203ENST00000418436 TIMM13Q9Y5L4 95 aaPredicted RBP11.32□□□□□ -0.6
RFC1-203ENST00000418436 WDR27A2RRH5 827 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 BIN1O00499 593 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 PSMA7O14818 248 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 IKBKBO14920 756 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 CETN3O15182 167 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 STAU1O95793 577 aaKnown RBP11.31□□□□□ -0.6
RFC1-203ENST00000418436 CST3P01034 146 aaPredicted RBP11.31□□□□□ -0.6
RFC1-203ENST00000418436 KRT19P08727 400 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 SPATA31D3P0C874 917 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 DLG4P78352 724 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 FKBP3Q00688 224 aaKnown RBP11.31□□□□□ -0.6
RFC1-203ENST00000418436 STIM1Q13586 685 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 C1orf220Q5T0J3 134 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 OVOS1Q6IE37 1185 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 ELMSAN1Q6PJG2 1045 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 CYP26C1Q6V0L0 522 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 C15orf39Q6ZRI6 1047 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 SPATA31D4Q6ZUB0 917 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 INTS8Q75QN2 995 aaKnown RBP11.31□□□□□ -0.6
RFC1-203ENST00000418436 RTL10Q7L3V2 364 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 GPR149Q86SP6 731 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 USP37Q86T82 979 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 GPT2Q8TD30 523 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 ADAMTS19Q8TE59 1207 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 HPDLQ96IR7 371 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 TSG101Q99816 390 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 PRKAG3Q9UGI9 489 aa11.31□□□□□ -0.6
RFC1-203ENST00000418436 C5orf42Q9H799 3197 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 TRIM49BA6NDI0 452 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 OR6C75A6NL08 312 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 GOLGA6L22H0YM25 854 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 RFPL2O75678 378 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 ZMYND10O75800 440 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 ATF2P15336 505 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 GCGRP47871 477 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 VAMP7P51809 220 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 BFSP1Q12934 665 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 MYO1EQ12965 1108 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 CBX2Q14781 532 aaPredicted RBP11.3□□□□□ -0.6
RFC1-203ENST00000418436 UVSSAQ2YD98 709 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 ZACNQ401N2 412 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 RARS2Q5T160 578 aaKnown RBP11.3□□□□□ -0.6
RFC1-203ENST00000418436 TDRD10Q5VZ19 366 aaKnown RBP11.3□□□□□ -0.6
RFC1-203ENST00000418436 WSCD1Q658N2 575 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 TPGS2Q68CL5 300 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms